RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 DMC1Q14565 340 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 ZC2HC1CQ53FD0 456 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 INTS6LQ5JSJ4 861 aaKnown RBP16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 DAB2IPQ5VWQ8 1189 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 EFCAB13Q8IY85 973 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 KIAA1958Q8N8K9 716 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 RPLP0P6Q8NHW5 317 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 HHIPQ96QV1 700 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 FBRSL1Q9HCM7 1045 aaKnown RBP16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 DDX43Q9NXZ2 648 aaKnown RBP16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 DENND4CQ5VZ89 1909 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 ANK1P16157 1881 aa16.93■□□□□ 0.3
HERPUD1-205ENST00000562914 BCLAF3A2AJT9 711 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 CAVIN2O95810 425 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 CKMP06732 381 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 PCSK1P29120 753 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 LHX1P48742 406 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 USP4Q13107 963 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 RABEP1Q15276 862 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 ZNF77Q15935 545 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 USP39Q53GS9 565 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 EDEM2Q9BV94 578 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 TMLHEQ9NVH6 421 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 GDAP2Q9NXN4 497 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 ITGA11Q9UKX5 1188 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 TCHHQ07283 1943 aa16.92■□□□□ 0.3
HERPUD1-205ENST00000562914 USP24Q9UPU5 2620 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 CNOT1A5YKK6 2376 aaKnown RBP16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 TADA3O75528 432 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 PPP1R37O75864 691 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 ADSSP30520 456 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 CREB5Q02930 508 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 EML3Q32P44 896 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 DPH6Q7L8W6 267 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 SPATA2LQ8IUW3 424 aaPredicted RBP16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 BRSK2Q8IWQ3 736 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 TOP6BLQ8N6T0 577 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 RIN3Q8TB24 985 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 LRRC15Q8TF66 581 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 EHD2Q9NZN4 543 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 STK17AQ9UEE5 414 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 L1RE1Q9UN81 338 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 AGAP1Q9UPQ3 857 aa16.91■□□□□ 0.3
HERPUD1-205ENST00000562914 TISP43B9A030 160 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 NFATC1O95644 943 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 ITGB3P05106 788 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 PROS1P07225 676 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 GAP43P17677 238 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 CYP2F1P24903 491 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 GJB2P29033 226 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 POLR2BP30876 1174 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 MAGEA11P43364 429 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 GPR15P49685 360 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 TFAMQ00059 246 aaKnown RBP16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 ALCAMQ13740 583 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 KCNB1Q14721 858 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 DDR2Q16832 855 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 PSAPL1Q6NUJ1 521 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 TSTD1Q8NFU3 115 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 ACCSQ96QU6 501 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 PKMYT1Q99640 499 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 STRA6Q9BX79 667 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 TRPC7Q9HCX4 862 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 ARHGAP26Q9UNA1 814 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 OBSL1O75147 1896 aa16.9■□□□□ 0.3
HERPUD1-205ENST00000562914 GABRDO14764 452 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 KHNYNO15037 678 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 GARTP22102 1010 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 GBP1P32455 592 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 NOVA1P51513 510 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 CDR1P51861 262 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 DGKEP52429 567 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 RBP5P82980 135 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 PSMD2Q13200 908 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 L1TD1Q5T7N2 865 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 PMS2CLQ68D20 193 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 RASSF3Q86WH2 238 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 SFR1Q86XK3 245 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 C1orf127Q8N9H9 656 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 SPATA17Q96L03 361 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 FAM213AQ9BRX8 229 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 SMOC1Q9H4F8 434 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 MRPL44Q9H9J2 332 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 RBAKQ9NYW8 714 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 CCDC39Q9UFE4 941 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 GTF3C4Q9UKN8 822 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 EML5Q05BV3 1969 aa16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 ZNF638Q14966 1978 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-205ENST00000562914 LNP1A1A4G5 178 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms