RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 DRICH1Q6PGQ1 229 aaPredicted RBP13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 CROCCP2Q86T23 111 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TMEM130Q8N3G9 435 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 BBOF1Q8ND07 529 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TRPV1Q8NER1 839 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 FBXO25Q8TCJ0 367 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 CCHCR1Q8TD31 782 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TMEM40Q8WWA1 233 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 SNF8Q96H20 258 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TSPYL1Q9H0U9 437 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 CHST7Q9NS84 486 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TSPAN16Q9UKR8 245 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TRPV2Q9Y5S1 764 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 SNX9Q9Y5X1 595 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 NFS1Q9Y697 457 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 hCG_1818297A0A087WSY0 165 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 A6NNZ2 444 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 NDC80O14777 642 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 NUDT17P0C025 328 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 C6orf222P0C671 652 aaPredicted RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 MYZAPP0CAP1 466 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ATF2P15336 505 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ITIH2P19823 946 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 CTGFP29279 349 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 FLT3P36888 993 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 KCNJ1P48048 391 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 LMAN1P49257 510 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 PMS2P54278 862 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 TUBB8Q3ZCM7 444 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 TFDP3Q5H9I0 405 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 FBXO47Q5MNV8 452 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 CEP85LQ5SZL2 805 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ZFYVE27Q5T4F4 411 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 AGBL2Q5U5Z8 902 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 HACE1Q8IYU2 909 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 STK32AQ8WU08 396 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ATG4AQ8WYN0 398 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 C18orf25Q96B23 403 aaPredicted RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ARL8AQ96BM9 186 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ATP6V1G3Q96LB4 118 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 MRPL45Q9BRJ2 306 aaKnown RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 PABPC3Q9H361 631 aaKnown RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 TMBIM4Q9HC24 238 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ASNSD1Q9NWL6 643 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 GDAP2Q9NXN4 497 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 HESX1Q9UBX0 185 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 ASIC3Q9UHC3 531 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 PTPN22Q9Y2R2 807 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 IPPQ9Y573 584 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 CASP8AP2Q9UKL3 1982 aa13.32□□□□□ -0.28
AC055717.2-201ENST00000561864 SMIM28A0A1B0GU29 152 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 MYADML2A6NDP7 307 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 DPYSL4O14531 572 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 PPEF2O14830 753 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 LRCH4O75427 683 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 KRT14P02533 472 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 TCF4P15884 667 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 GPD1P21695 349 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 AKAP5P24588 427 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 PCK1P35558 622 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CDKN2BP42772 138 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 VEGFBP49765 207 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 TAF6P49848 677 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 SKOR1P84550 965 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 SNX1Q13596 522 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 TAZQ16635 292 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 FAM102AQ5T9C2 384 aaPredicted RBP13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 MFSD7Q6UXD7 560 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 ZNF365Q70YC5 407 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 HOOK3Q86VS8 718 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 ZDHHC17Q8IUH5 632 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CCDC89Q8N998 374 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 TRIB2Q92519 343 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 ZBTB9Q96C00 473 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CAPNS2Q96L46 248 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CCDC114Q96M63 670 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CNPY3Q9BT09 278 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 APOL6Q9BWW8 343 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 HEMGNQ9BXL5 484 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 FOXP3Q9BZS1 431 aa13.31□□□□□ -0.28
AC055717.2-201ENST00000561864 CXCL16Q9H2A7 254 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms