RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 MMTAG2Q9BU76 263 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 SLC37A4O43826 429 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 ATP4AP20648 1035 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 LRRC74AQ0VAA2 488 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 GRB10Q13322 594 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 TWF2Q6IBS0 349 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 ACAD10Q6JQN1 1059 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 LRRC74BQ6ZQY2 392 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 BNIPLQ7Z465 357 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 THEM5Q8N1Q8 247 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 RNF149Q8NC42 400 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 MIEF2Q96C03 454 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 EPAS1Q99814 870 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PCDHB2Q9Y5E7 798 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 MAP3K4Q9Y6R4 1608 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 F8W8V4 182 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 ASNSP08243 561 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 CHRNA5P30532 468 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 RRM2BQ7LG56 351 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PCDHA10Q9Y5I2 948 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 MAP2K7O14733 419 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 RECQLP46063 649 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 WASHC2DQ5SRD0 308 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 TMC3Q7Z5M5 1100 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PCDHGB4Q9UN71 923 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 CAB39Q9Y376 341 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PRPF4O43172 522 aaKnown RBP eCLIP10.61□□□□□ -0.711e-9■■■■■ 31.7
GTF3C1-202ENST00000561623 TSC22D2O75157 780 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 AP3M2P53677 418 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 TMEM79Q9BSE2 394 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 C2orf40Q9H1Z8 148 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
GTF3C1-202ENST00000561623 RGS5O15539 181 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 VEGFAP15692 232 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 CASP4P49662 377 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF235Q14590 738 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 SGO1Q5FBB7 561 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 SDE2Q6IQ49 451 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 C11orf74Q86VG3 221 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 P3H2Q8IVL5 708 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 DEFB107AQ8IZN7 70 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 C1orf131Q8NDD1 294 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 AGAP11Q8TF27 550 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 ILKAPQ9H0C8 392 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 RSAD1Q9HA92 442 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 TMEM8AQ9HCN3 771 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 INO80Q9ULG1 1556 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 EEF2KO00418 725 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 PRKCBP05771 671 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 THRAP10827 490 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 KCNT1Q5JUK3 1230 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 LRRC6Q86X45 466 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 BTBD10Q9BSF8 475 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 DAPK2Q9UIK4 370 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 C2CD2Q9Y426 696 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 FXR2P51116 673 aaKnown RBP eCLIP10.6□□□□□ -0.715e-7■■■■□ 22.1
GTF3C1-202ENST00000561623 MAPK10P53779 464 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 CDK17Q00537 523 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 PDPK2PQ6A1A2 396 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 AGBL1Q96MI9 1066 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF556Q9HAH1 456 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 MTMR4Q9NYA4 1195 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 SAC3D1A6NKF1 404 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 LAMC2Q13753 1193 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 BMPR2Q13873 1038 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 ADRM1Q16186 407 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 AASDHQ4L235 1098 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 DENND5BQ6ZUT9 1274 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 IPMKQ8NFU5 416 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 PAIP1Q9H074 479 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 MSRAQ9UJ68 235 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 LRCH1Q9Y2L9 728 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 TRAPPC3O43617 180 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 FAM58BPP0C7Q3 252 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 GLRBP48167 497 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 NUP107P57740 925 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 DGKZQ13574 1117 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 UGP2Q16851 508 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 PREPLQ4J6C6 727 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 SLC20A1Q8WUM9 679 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 TSPAN17Q96FV3 270 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 TMEM121Q9BTD3 319 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 HTATIP2Q9BUP3 242 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 CD274Q9NZQ7 290 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 JCADQ9P266 1359 aa10.6□□□□□ -0.71
GTF3C1-202ENST00000561623 EIF3DO15371 548 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms