RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CBWD5Q5RIA9 395 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 STXBP5Q5T5C0 1151 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 GPR158Q5T848 1215 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 FILIP1Q7Z7B0 1213 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 TMEM174Q8WUU8 243 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 TAF4BQ92750 862 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 EDAQ92838 391 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 SEMA4DQ92854 862 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 FGF14Q92915 247 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 TATDN2Q93075 761 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 PCED1BQ96HM7 432 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 TNIP3Q96KP6 325 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 CEP63Q96MT8 703 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 RPP25Q9BUL9 199 aaKnown RBP10.79□□□□□ -0.68
HERC1-212ENST00000561348 DNAJC25Q9H1X3 360 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 TRPC7Q9HCX4 862 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 FAM49BQ9NUQ9 324 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 RAB20Q9NX57 234 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 IGSF9Q9P2J2 1179 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 NME7Q9Y5B8 376 aa10.79□□□□□ -0.68
HERC1-212ENST00000561348 DENND4AQ7Z401 1863 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 SLC38A8A6NNN8 435 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 DPYSL4O14531 572 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 CCDC130P13994 396 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 GTF2H1P32780 548 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 MTIF2P46199 727 aaKnown RBP10.78□□□□□ -0.68
HERC1-212ENST00000561348 NLRP12P59046 1061 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 CETN1Q12798 172 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 GRM2Q14416 872 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 CLEC17AQ6ZS10 378 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 TRIM67Q6ZTA4 783 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 MTSS1LQ765P7 747 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 FRMD5Q7Z6J6 570 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 SLC44A3Q8N4M1 653 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 FLCNQ8NFG4 579 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 SHKBP1Q8TBC3 707 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 ZSCAN18Q8TBC5 510 aaPredicted RBP10.78□□□□□ -0.68
HERC1-212ENST00000561348 MYCBPAPQ8TBZ2 947 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 SPATA18Q8TC71 538 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 PSMG2Q969U7 264 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 PBXIP1Q96AQ6 731 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 ZSWIM3Q96MP5 696 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 ZNF518BQ9C0D4 1074 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 NIF3L1Q9GZT8 377 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 APOBEC3GQ9HC16 384 aaKnown RBP10.78□□□□□ -0.68
HERC1-212ENST00000561348 EPS15L1Q9UBC2 864 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 HMGXB4Q9UGU5 601 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 RWDD2AQ9UIY3 292 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 CA14Q9ULX7 337 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 ASB3Q9Y575 518 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.78□□□□□ -0.68
HERC1-212ENST00000561348 ATP8B3O60423 1300 aa10.78□□□□□ -0.68
HERC1-212ENST00000561348 TMEM221A6NGB7 291 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 F8VP50 259 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 M0R296 226 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 NRG2O14511 850 aaPredicted RBP10.77□□□□□ -0.69
HERC1-212ENST00000561348 STAU1O95793 577 aaKnown RBP10.77□□□□□ -0.69
HERC1-212ENST00000561348 GNA14O95837 355 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 CSH1P0DML2 217 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 CSH2P0DML3 217 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 VIPR2P41587 438 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 ASPAP45381 313 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 FMO5P49326 533 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 HTR4Q13639 388 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 FAM78AQ5JUQ0 283 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 PRSS36Q5K4E3 855 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 TANGO2Q6ICL3 276 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 FAM171BQ6P995 826 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 YAF2Q8IY57 180 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 PPM1KQ8N3J5 372 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 MAB21L3Q8N8X9 362 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 C12orf29Q8N999 325 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 LEMD2Q8NC56 503 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 SLC2A14Q8TDB8 520 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 SLC35C1Q96A29 364 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 CNOT6LQ96LI5 555 aaKnown RBP10.77□□□□□ -0.69
HERC1-212ENST00000561348 HEXIM2Q96MH2 286 aaKnown RBP10.77□□□□□ -0.69
HERC1-212ENST00000561348 PKMYT1Q99640 499 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 ARID3AQ99856 593 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 LRFN3Q9BTN0 628 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 B3GNT5Q9BYG0 378 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 DNAI2Q9GZS0 605 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 SMG9Q9H0W8 520 aaKnown RBP10.77□□□□□ -0.69
HERC1-212ENST00000561348 ZFP14Q9HCL3 533 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 KRT82Q9NSB4 513 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 ZFP37Q9Y6Q3 630 aaPredicted RBP10.77□□□□□ -0.69
HERC1-212ENST00000561348 MYH10P35580 1976 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 DOCK8Q8NF50 2099 aa10.77□□□□□ -0.69
HERC1-212ENST00000561348 NOTCH4Q99466 2003 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 AP1G2O75843 785 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 MBD3O95983 291 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 PDGFBP01127 241 aaPredicted RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 AFPP02771 609 aaKnown RBP10.76□□□□□ -0.69
HERC1-212ENST00000561348 POU2F2P09086 479 aa10.76□□□□□ -0.69
HERC1-212ENST00000561348 PRKCSHP14314 528 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms