RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 HMGXB4Q9UGU5 601 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 NUMBLQ9Y6R0 609 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 MYO10Q9HD67 2058 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 NDST1P52848 882 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 RPL10AP62906 217 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 SHKBP1Q8TBC3 707 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 MED15Q96RN5 788 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 C1QTNF1Q9BXJ1 281 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 BCO2Q9BYV7 579 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 MOSPD3O75425 235 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 FGFR1OPO95684 399 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 GNA14O95837 355 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 CD58P19256 250 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 NLRP12P59046 1061 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 TDGQ13569 410 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 HTR4Q13639 388 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 TEAD2Q15562 447 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 WDR44Q5JSH3 913 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 POTEHQ6S545 545 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 PARM1Q6UWI2 310 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 ACOT1Q86TX2 421 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 CREBRFQ8IUR6 639 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 FGF14Q92915 247 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 TNIP3Q96KP6 325 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 SLITRK6Q9H5Y7 841 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 GDE1Q9NZC3 331 aa21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 MAGED2Q9UNF1 606 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-210ENST00000561277 ANHXE9PGG2 379 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 CLDN5O00501 218 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 MBD3O95983 291 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 GABRR2P28476 465 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 MAGEA11P43364 429 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 FMO5P49326 533 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 GAREM2Q75VX8 874 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 ZNF518BQ9C0D4 1074 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 ATXN3LQ9H3M9 355 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 C11orf16Q9NQ32 467 aa21.22■□□□□ 0.99
TSPAN3-210ENST00000561277 MICAL2O94851 1124 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 CCDC192P0DO97 292 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 GRIK1P39086 918 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 TPD52L1Q16890 204 aaPredicted RBP21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 VSTM1Q6UX27 236 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 MTSS1LQ765P7 747 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 TRIM59Q8IWR1 403 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 CNOT6LQ96LI5 555 aaKnown RBP21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 KXD1Q9BQD3 176 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 RPP25Q9BUL9 199 aaKnown RBP21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 CYP3A43Q9HB55 503 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 DACH1Q9UI36 760 aa21.21■□□□□ 0.99
TSPAN3-210ENST00000561277 NARSO43776 548 aaKnown RBP21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 CSH1P0DML2 217 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 CSH2P0DML3 217 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 HMGA1P17096 107 aaKnown RBP21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 MARSP56192 900 aaKnown RBP21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 LRMPQ12912 555 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 TMEM31Q5JXX7 168 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 STXBP5Q5T5C0 1151 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 TRIM67Q6ZTA4 783 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 UNC93AQ86WB7 457 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 UBALD2Q8IYN6 164 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 SLC44A3Q8N4M1 653 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 NXPE3Q969Y0 559 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 GCNAQ96QF7 691 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 ARID3AQ99856 593 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 MED10Q9BTT4 135 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 B3GNT5Q9BYG0 378 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 ELOVL4Q9GZR5 314 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 COQ4Q9Y3A0 265 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 PTPRDP23468 1912 aa21.2■□□□□ 0.98
TSPAN3-210ENST00000561277 SLC38A8A6NNN8 435 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 FGF19O95750 216 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 ANXA13P27216 316 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 CACNA2D1P54289 1103 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 CYP4F8P98187 520 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 SIGLEC14Q08ET2 396 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 INCA1Q0VD86 236 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 TATDN2Q93075 761 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 ZSWIM3Q96MP5 696 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 TWNKQ96RR1 684 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 IL21Q9HBE4 155 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 FAM49BQ9NUQ9 324 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 DUSP12Q9UNI6 340 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 F8VP50 259 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 CILPO75339 1184 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 CCDC130P13994 396 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 TRIM21P19474 475 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 CDC25CP30307 473 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 KCNH2Q12809 1159 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 ZNF394Q53GI3 561 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 FAM78AQ5JUQ0 283 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 FAM35AQ86V20 835 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 C12orf29Q8N999 325 aa21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 ZSCAN18Q8TBC5 510 aaPredicted RBP21.19■□□□□ 0.98
TSPAN3-210ENST00000561277 ATP8B3O60423 1300 aa21.18■□□□□ 0.98
TSPAN3-210ENST00000561277 TECTAO75443 2155 aa21.18■□□□□ 0.98
TSPAN3-210ENST00000561277 TRIM66O15016 1216 aa21.18■□□□□ 0.98
TSPAN3-210ENST00000561277 ARHGAP15Q53QZ3 475 aa21.18■□□□□ 0.98
TSPAN3-210ENST00000561277 CCDC183Q5T5S1 534 aa21.18■□□□□ 0.98
TSPAN3-210ENST00000561277 GPR158Q5T848 1215 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms