RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 XPOTO43592 962 aaKnown RBP4.34□□□□□ -1.71
USP8-216ENST00000561206 FGBP02675 491 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 RARBP10826 455 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 NDUFB7P17568 137 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 CHRM3P20309 590 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 SNAPC2Q13487 334 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 KHDC1Q4VXA5 237 aaKnown RBP4.34□□□□□ -1.71
USP8-216ENST00000561206 VPS53Q5VIR6 699 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 ANKRD16Q6P6B7 361 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 ZNF804AQ7Z570 1209 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 TTC7BQ86TV6 843 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 COQ8BQ96D53 544 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 ZC3H10Q96K80 434 aaKnown RBP4.34□□□□□ -1.71
USP8-216ENST00000561206 TINAGL1Q9GZM7 467 aaPredicted RBP4.34□□□□□ -1.71
USP8-216ENST00000561206 SIK2Q9H0K1 926 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 TMX1Q9H3N1 280 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 SERHLQ9NQF3 203 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 TXLNGQ9NUQ3 528 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 AGAP1Q9UPQ3 857 aa4.34□□□□□ -1.71
USP8-216ENST00000561206 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 H0YIZ8 118 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 SMAD6O43541 496 aaKnown RBP4.33□□□□□ -1.72
USP8-216ENST00000561206 KIF20AO95235 890 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 FTH1P19P0C7X4 201 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 PIK3CGP48736 1102 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 DSC2Q02487 901 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 KIF22Q14807 665 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 ABCB5Q2M3G0 1257 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 Q4G0T1 1027 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 AARS2Q5JTZ9 985 aaKnown RBP4.33□□□□□ -1.72
USP8-216ENST00000561206 SYDE2Q5VT97 1194 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 NANOGP1Q8N7R0 232 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 CAMKK2Q96RR4 588 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 TRMOQ9BU70 441 aa4.33□□□□□ -1.72
USP8-216ENST00000561206 VPS4BO75351 444 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 PDHA1P08559 390 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 TMEM191BP0C7N4 346 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 MYBL2P10244 700 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 SCP2P22307 547 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 PRDX5P30044 214 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 GCLCP48506 637 aaPredicted RBP4.32□□□□□ -1.72
USP8-216ENST00000561206 UAP1L1Q3KQV9 507 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 DDX42Q86XP3 938 aaKnown RBP eCLIP4.32□□□□□ -1.72
USP8-216ENST00000561206 FAM90A1Q86YD7 464 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 ADHFE1Q8IWW8 467 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 C8orf58Q8NAV2 365 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 C16orf52Q8NHV5 167 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 TRNAU1APQ9NX07 287 aaKnown RBP4.32□□□□□ -1.72
USP8-216ENST00000561206 MRFAP1Q9Y605 127 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
USP8-216ENST00000561206 LRRC14BA6NHZ5 514 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 CD8B2A6NJW9 211 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 SMIM22K7EJ46 135 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 PPM1DO15297 605 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 DNAJB5O75953 348 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 CLSTN1O94985 981 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 IL6RP08887 468 aaPredicted RBP4.31□□□□□ -1.72
USP8-216ENST00000561206 FAM163BP0C2L3 166 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 ARHGAP25P42331 645 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 HTR6P50406 440 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 ADKP55263 362 aaKnown RBP4.31□□□□□ -1.72
USP8-216ENST00000561206 EEFSECP57772 596 aaKnown RBP4.31□□□□□ -1.72
USP8-216ENST00000561206 UBAP2Q5T6F2 1119 aaKnown RBP4.31□□□□□ -1.72
USP8-216ENST00000561206 MAVSQ7Z434 540 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 WDR53Q7Z5U6 358 aaPredicted RBP4.31□□□□□ -1.72
USP8-216ENST00000561206 DTX2Q86UW9 622 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 FANCBQ8NB91 859 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 PRSS3P2Q8NHM4 247 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 C1orf43Q9BWL3 253 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 SLAMF7Q9NQ25 335 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 DLL3Q9NYJ7 618 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 TRHDEQ9UKU6 1024 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 ICKQ9UPZ9 632 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 SH2B3Q9UQQ2 575 aa4.31□□□□□ -1.72
USP8-216ENST00000561206 SHTN1A0MZ66 631 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 SMARCA1P28370 1054 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 PHKA1P46020 1223 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 ALDH9A1P49189 494 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 LEXMQ3ZCV2 418 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 C3orf20Q8ND61 904 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 ZDHHC8Q9ULC8 765 aa4.3□□□□□ -1.72
USP8-216ENST00000561206 M0QYG6 137 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 QSOX1O00391 747 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 TLR5O60602 858 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 ARIH2O95376 493 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 GNAI2P04899 355 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 CYP2C18P33260 490 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 LIPAP38571 399 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 CLCN2P51788 898 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 MTMR1Q13613 665 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 BOP1Q14137 746 aaKnown RBP4.29□□□□□ -1.72
USP8-216ENST00000561206 PCBP2Q15366 365 aaKnown RBP eCLIP4.29□□□□□ -1.72
USP8-216ENST00000561206 TMEM108Q6UXF1 575 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 USP37Q86T82 979 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 DDX17Q92841 729 aaKnown RBP4.29□□□□□ -1.72
USP8-216ENST00000561206 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 WDCPQ9H6R7 721 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 POLHQ9Y253 713 aa4.29□□□□□ -1.72
USP8-216ENST00000561206 ATP8A1Q9Y2Q0 1164 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms