RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 TRIM68Q6AZZ1 485 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 C4orf50Q6ZRC1 276 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 TMEM150AQ86TG1 271 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 SPATA2LQ8IUW3 424 aaPredicted RBP11.08□□□□□ -0.64
CSHL1-210ENST00000561003 LRRC52Q8N7C0 313 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 RPLP0P6Q8NHW5 317 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 RAD54LQ92698 747 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 PI4K2AQ9BTU6 479 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 EDEM2Q9BV94 578 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 TMEM9BQ9NQ34 198 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 DDX43Q9NXZ2 648 aaKnown RBP11.08□□□□□ -0.64
CSHL1-210ENST00000561003 CCDC39Q9UFE4 941 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 CCL26Q9Y258 94 aa11.08□□□□□ -0.64
CSHL1-210ENST00000561003 VWA8A3KMH1 1905 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 ARID2Q68CP9 1835 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 OTOL1A6NHN0 477 aaPredicted RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 C4orf47A7E2U8 309 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 ANKRD63C9JTQ0 380 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 KIAA0391O15091 583 aaKnown RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 MAP3K13O43283 966 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 ARSAP15289 507 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 GAP43P17677 238 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 MAGEA11P43364 429 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 MRPS21P82921 87 aaKnown RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 TFAMQ00059 246 aaKnown RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 KCNB1Q14721 858 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 SURF1Q15526 300 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 DDR2Q16832 855 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 PSAPL1Q6NUJ1 521 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 PKN3Q6P5Z2 889 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 VSTM1Q6UX27 236 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 TOP6BLQ8N6T0 577 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 KDF1Q8NAX2 398 aaPredicted RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 LARP4BQ92615 738 aaKnown RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 CHFRQ96EP1 664 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 ACCSQ96QU6 501 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 SLC32A1Q9H598 525 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 FBRSL1Q9HCM7 1045 aaKnown RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 TRPC7Q9HCX4 862 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 RXFP3Q9NSD7 469 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
CSHL1-210ENST00000561003 ITGA11Q9UKX5 1188 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 AGAP1Q9UPQ3 857 aa11.07□□□□□ -0.64
CSHL1-210ENST00000561003 ZBTB24O43167 697 aaPredicted RBP11.06□□□□□ -0.64
CSHL1-210ENST00000561003 GARTP22102 1010 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 CYP2F1P24903 491 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 NMT1P30419 496 aaKnown RBP11.06□□□□□ -0.64
CSHL1-210ENST00000561003 ALCAMQ13740 583 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 MCM6Q14566 821 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 EML3Q32P44 896 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 ZC2HC1CQ53FD0 456 aaPredicted RBP11.06□□□□□ -0.64
CSHL1-210ENST00000561003 INTS6LQ5JSJ4 861 aaKnown RBP11.06□□□□□ -0.64
CSHL1-210ENST00000561003 SLC39A4Q6P5W5 647 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 BRAPQ7Z569 592 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 SYCP3Q8IZU3 236 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 PDCL2Q8N4E4 241 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 SH3RF2Q8TEC5 729 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 SPATA17Q96L03 361 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 HHIPQ96QV1 700 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 CYP2S1Q96SQ9 504 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 MRPL44Q9H9J2 332 aaKnown RBP11.06□□□□□ -0.64
CSHL1-210ENST00000561003 POLMQ9NP87 494 aaPredicted RBP11.06□□□□□ -0.64
CSHL1-210ENST00000561003 TRPM5Q9NZQ8 1165 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 GTF3C4Q9UKN8 822 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 ARHGAP26Q9UNA1 814 aa11.06□□□□□ -0.64
CSHL1-210ENST00000561003 COL4A3Q01955 1670 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 KMT2BQ9UMN6 2715 aaPredicted RBP11.05□□□□□ -0.64
CSHL1-210ENST00000561003 GABRDO14764 452 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 PLCG1P19174 1290 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 ANXA13P27216 316 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 TXLNAP40222 546 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 EIF2DP41214 584 aaKnown RBP11.05□□□□□ -0.64
CSHL1-210ENST00000561003 RABEP1Q15276 862 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 ZNF77Q15935 545 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 LARP1BQ659C4 914 aaKnown RBP11.05□□□□□ -0.64
CSHL1-210ENST00000561003 PMS2CLQ68D20 193 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
CSHL1-210ENST00000561003 UNQ6494/PRO21346Q6UXR6 183 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 STXBP4Q6ZWJ1 553 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 SV2BQ7L1I2 683 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 LPCAT2Q7L5N7 544 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 CYP2U1Q7Z449 544 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 RASSF3Q86WH2 238 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSHL1-210ENST00000561003 SCN4BQ8IWT1 228 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 ADGRG2Q8IZP9 1017 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 TTC16Q8NEE8 873 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 USP33Q8TEY7 942 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 SPACA7Q96KW9 195 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 CNOT6LQ96LI5 555 aaKnown RBP11.05□□□□□ -0.64
CSHL1-210ENST00000561003 FIZ1Q96SL8 496 aa11.05□□□□□ -0.64
CSHL1-210ENST00000561003 FAM213AQ9BRX8 229 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms