RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SNX25Q9H3E2 840 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 UBN1Q9NPG3 1134 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 MIOSQ9NXC5 875 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 GABRDO14764 452 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 INPPL1O15357 1258 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 PHF2O75151 1096 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 AFF1P51825 1210 aaKnown RBP13.62□□□□□ -0.23
SNX1-211ENST00000560829 EPHB4P54760 987 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
SNX1-211ENST00000560829 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 TMEM110Q86TL2 294 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
SNX1-211ENST00000560829 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 JOSD2Q8TAC2 188 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 MAIP1Q8WWC4 291 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 LPPQ93052 612 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 PGBD4Q96DM1 585 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 ADAM2Q99965 735 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNX1-211ENST00000560829 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 DPEP3Q9H4B8 488 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 EPB41L5Q9HCM4 733 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 HESX1Q9UBX0 185 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 AMACRQ9UHK6 382 aa13.62□□□□□ -0.23
SNX1-211ENST00000560829 F8VP50 259 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 GOLGA8SH3BPF8 625 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 ARVCFO00192 962 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 RPL34P49207 117 aaKnown RBP13.61□□□□□ -0.23
SNX1-211ENST00000560829 AARSP49588 968 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX1-211ENST00000560829 HTRA3P83110 453 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 CASP8Q14790 479 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 ACAP1Q15027 740 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 POLNQ7Z5Q5 900 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 ANKRD52Q8NB46 1076 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 TNIP3Q96KP6 325 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 RUNDC3BQ96NL0 473 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 VIPAS39Q9H9C1 493 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 PCYOX1Q9UHG3 505 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 PDCD11Q14690 1871 aaKnown RBP13.61□□□□□ -0.23
SNX1-211ENST00000560829 FAM187AA6NFU0 413 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 ZSCAN5CA6NGD5 496 aaPredicted RBP13.61□□□□□ -0.23
SNX1-211ENST00000560829 PODXLO00592 558 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 CYB561D2O14569 222 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 RARAP10276 462 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 PAX3P23760 479 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 YY1P25490 414 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 LMO2P25791 158 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 SCNN1GP51170 649 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 BCAT1P54687 386 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 SNX16P57768 344 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 NNTQ13423 1086 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 CUL1Q13616 776 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 DAB2IPQ5VWQ8 1189 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 OSTM1Q86WC4 334 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 ZDHHC17Q8IUH5 632 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 TMEM86AQ8N2M4 240 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 CAVIN3Q969G5 261 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 LRRC19Q9H756 370 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 METTL5Q9NRN9 209 aaKnown RBP13.61□□□□□ -0.23
SNX1-211ENST00000560829 FAM49BQ9NUQ9 324 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 USTQ9Y2C2 406 aa13.61□□□□□ -0.23
SNX1-211ENST00000560829 TCRBV7S2A1N4TA0A589 114 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 KBTBD13C9JR72 458 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 E5RJQ4 531 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 HCRTO43612 131 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 PSMA2P25787 234 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 FNTAP49354 379 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
SNX1-211ENST00000560829 CDK7P50613 346 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 CLCNKBP51801 687 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 DR1Q01658 176 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 PDE4CQ08493 712 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
SNX1-211ENST00000560829 GRIK3Q13003 919 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 KLF1Q13351 362 aaPredicted RBP13.6□□□□□ -0.23
SNX1-211ENST00000560829 MBTPS1Q14703 1052 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 ADAT2Q7Z6V5 191 aaKnown RBP13.6□□□□□ -0.23
SNX1-211ENST00000560829 ECHDC2Q86YB7 292 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
SNX1-211ENST00000560829 RCOR2Q8IZ40 523 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 RBM41Q96IZ5 413 aaKnown RBP13.6□□□□□ -0.23
SNX1-211ENST00000560829 SENP8Q96LD8 212 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 HINFPQ9BQA5 517 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 ST7Q9NRC1 585 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
SNX1-211ENST00000560829 SCN1AP35498 2009 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 ESYT3A0FGR9 886 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 DNM1LO00429 736 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 TTI1O43156 1089 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 LRCH4O75427 683 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 PDGFRBP09619 1106 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 TCF4P15884 667 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 PTPN7P35236 360 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms