RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 C1orf131Q8NDD1 294 aaKnown RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 IPO4Q8TEX9 1081 aaKnown RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 RABGGTAQ92696 567 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 C18orf8Q96DM3 657 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 ARHGEF26Q96DR7 871 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 WDR24Q96S15 920 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 C11orf70Q9BRQ4 267 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 NUP85Q9BW27 656 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 DPEP3Q9H4B8 488 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 CAPN6Q9Y6Q1 641 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 DOCK4Q8N1I0 1966 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 SF3B1O75533 1304 aaKnown RBP eCLIP9.1□□□□□ -0.951e-10■■■■■ 241.2
TRAF3-209ENST00000560463 PALMO75781 387 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 ITGB1P05556 798 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 ACRP10323 421 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 RRM1P23921 792 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 IGFBP6P24592 240 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-209ENST00000560463 ACADSBP45954 432 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 RPL34P49207 117 aaKnown RBP9.1□□□□□ -0.95
TRAF3-209ENST00000560463 SLC11A1P49279 550 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 GATMP50440 423 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 BCAR1P56945 870 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 TSPY1Q01534 308 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 PDCLQ13371 301 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 MEI1Q5TIA1 1274 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 PAPD7Q5XG87 772 aaKnown RBP9.1□□□□□ -0.95
TRAF3-209ENST00000560463 FAM171BQ6P995 826 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 MMS22LQ6ZRQ5 1243 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 DNAAF5Q86Y56 855 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 ZDHHC17Q8IUH5 632 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 C7orf61Q8IZ16 206 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 LRRC57Q8N9N7 239 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 C3orf20Q8ND61 904 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF564Q8TBZ8 553 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-209ENST00000560463 SLC2A14Q8TDB8 520 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 HASPINQ8TF76 798 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 SLC35F5Q8WV83 523 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 BADQ92934 168 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 HSFY1Q96LI6 401 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 DUSP16Q9BY84 665 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 UBXN6Q9BZV1 441 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 CWH43Q9H720 699 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 SYNCQ9H7C4 482 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 OSGEPQ9NPF4 335 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 FAM49BQ9NUQ9 324 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 STK39Q9UEW8 545 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 CYTH4Q9UIA0 394 aa9.1□□□□□ -0.95
TRAF3-209ENST00000560463 PRG3Q9Y2Y8 225 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-209ENST00000560463 TIMM13Q9Y5L4 95 aaPredicted RBP9.1□□□□□ -0.95
TRAF3-209ENST00000560463 MYO9BQ13459 2157 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 GRID2IPA4D2P6 1211 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SIGLEC16A6NMB1 481 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 H7C4K7 107 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 I3L4J1 428 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 MYO1FO00160 1098 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 XPO1O14980 1071 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 BUB1BO60566 1050 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 CCDC130P13994 396 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 NPR3P17342 541 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 TCP1P17987 556 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 LAG3P18627 525 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 FGFR3P22607 806 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 ACAT1P24752 427 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SSTR3P32745 418 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SCNN1AP37088 669 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 PLA2G4AP47712 749 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 DEFB103AP81534 67 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 HTRA4P83105 476 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 PDE4CQ08493 712 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SMARCB1Q12824 385 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 MRPL58Q14197 206 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 BTG3Q14201 252 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 PTPN20Q4JDL3 420 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 MDH1BQ5I0G3 518 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 INTS6LQ5JSJ4 861 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 TMEM240Q5SV17 173 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 PPP1R15BQ5SWA1 713 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 DNAJC24Q6P3W2 148 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 FUT10Q6P4F1 479 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 C4orf50Q6ZRC1 276 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF365Q70YC5 407 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 C16orf59Q7L2K0 433 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 OTOP2Q7RTS6 562 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 PEX26Q7Z412 305 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 DAAM2Q86T65 1068 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 TMEM110Q86TL2 294 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 TTC30AQ86WT1 665 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 XYLT1Q86Y38 959 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 DCP1BQ8IZD4 617 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 FUKQ8N0W3 1084 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 UBA3Q8TBC4 463 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 FEZF2Q8TBJ5 459 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 PHOSPHO2Q8TCD6 241 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 KCTD13Q8WZ19 329 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 CPXM1Q96SM3 734 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SLC9A7Q96T83 725 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 RTP3Q9BQQ7 232 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms