RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CCINQ13939 588 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 GAS6Q14393 721 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 ZNF268Q14587 947 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-214ENST00000560402 SURF1Q15526 300 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 RSPO4Q2I0M5 234 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-214ENST00000560402 INTS6LQ5JSJ4 861 aaKnown RBP14.56□□□□□ -0.08
SMAD3-214ENST00000560402 TXNDC11Q6PKC3 985 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 LRRTM3Q86VH5 581 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 LONP2Q86WA8 852 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 TOP6BLQ8N6T0 577 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 GIPC2Q8TF65 315 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 SAAL1Q96ER3 474 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 TRMT2BQ96GJ1 504 aaKnown RBP14.56□□□□□ -0.08
SMAD3-214ENST00000560402 FUBP3Q96I24 572 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMAD3-214ENST00000560402 TIGD1Q96MW7 591 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 LRRC27Q9C0I9 530 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 IKZF4Q9H2S9 585 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 PANK4Q9NVE7 773 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 GTSE1Q9NYZ3 720 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 TBC1D7Q9P0N9 293 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 CDV3Q9UKY7 258 aaKnown RBP14.56□□□□□ -0.08
SMAD3-214ENST00000560402 USP18Q9UMW8 372 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 L1RE1Q9UN81 338 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 AGAP1Q9UPQ3 857 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 RALGAPA1Q6GYQ0 2036 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 K7ESF4 209 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 FOXD2O60548 495 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-214ENST00000560402 RETP07949 1114 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 HMGA1P17096 107 aaKnown RBP14.55□□□□□ -0.08
SMAD3-214ENST00000560402 LHX1P48742 406 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 CASP5P51878 434 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 AMPD2Q01433 879 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 TYRO3Q06418 890 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 PON2Q15165 354 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 CAMK4Q16566 473 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 STX1AQ16623 288 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 CFAP221Q4G0U5 840 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 ADGRF2Q8IZF7 708 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 GPD1LQ8N335 351 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 EXOC4Q96A65 974 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 ANKRD36BP1Q96IX9 119 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 ZFYVE19Q96K21 471 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 LRRC3BQ96PB8 259 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 SLC46A2Q9BY10 475 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 NAT10Q9H0A0 1025 aaKnown RBP14.55□□□□□ -0.08
SMAD3-214ENST00000560402 CUEDC2Q9H467 287 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 RBM12Q9NTZ6 932 aaKnown RBP14.55□□□□□ -0.08
SMAD3-214ENST00000560402 DDX43Q9NXZ2 648 aaKnown RBP14.55□□□□□ -0.08
SMAD3-214ENST00000560402 R3HCC1Q9Y3T6 440 aaKnown RBP14.55□□□□□ -0.08
SMAD3-214ENST00000560402 SPAG17Q6Q759 2223 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 KIAA1549LQ6ZVL6 1849 aa14.55□□□□□ -0.08
SMAD3-214ENST00000560402 NOL4O94818 638 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 SYKP43405 635 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 WNT7BP56706 349 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 RBP5P82980 135 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 TNK2Q07912 1038 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 MYO1EQ12965 1108 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 PRR23BQ6ZRT6 265 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 Q6ZS52 159 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 DPH6Q7L8W6 267 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 TMEM150AQ86TG1 271 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 FMR1NBQ8N0W7 255 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-214ENST00000560402 CSGALNACT2Q8N6G5 542 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 RNF214Q8ND24 703 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 CXorf38Q8TB03 319 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 MYRFLQ96LU7 910 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 CEP295NLQ96MC4 621 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 PKMYT1Q99640 499 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 FAM83CQ9BQN1 747 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 CBWD1Q9BRT8 395 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 RTKNQ9BST9 563 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 PI4K2AQ9BTU6 479 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 MTMR12Q9C0I1 747 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 TDP1Q9NUW8 608 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 TMLHEQ9NVH6 421 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 ANO10Q9NW15 660 aa14.54□□□□□ -0.08
SMAD3-214ENST00000560402 UBE4BO95155 1302 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 CCDC163A0A0D9SF12 145 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 MED19A0JLT2 244 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 CHURC1-FNTBB4DL54 471 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 GABRDO14764 452 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 EIF3DO15371 548 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 PFKFB1P16118 471 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 TGM1P22735 817 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 MAGEA11P43364 429 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 FNTBP49356 437 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 GRSF1Q12849 480 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 RUNX3Q13761 415 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 SIM2Q14190 667 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 PDGFRLQ15198 375 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 WDR44Q5JSH3 913 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 RESP18Q5W5W9 173 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 C4orf50Q6ZRC1 276 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 MON1AQ86VX9 555 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 WDR5BQ86VZ2 330 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 MAB21L3Q8N8X9 362 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 ENGASEQ8NFI3 743 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms