RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 PRAMEF12O95522 483 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 FAM163BP0C2L3 166 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 LMO2P25791 158 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 CCDC142Q17RM4 750 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 ARHGAP29Q52LW3 1261 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 SDHAF4Q5VUM1 108 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 SPATA2LQ8IUW3 424 aaPredicted RBP21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 FAM3CQ92520 227 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 ZNF516Q92618 1163 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 SEMA4AQ9H3S1 761 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 FBXO4Q9UKT5 387 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 NDRG2Q9UN36 371 aaKnown RBP21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 ATP6V1DQ9Y5K8 247 aa21.91■■□□□ 1.1
CHRNA3-207ENST00000559941 SOBPA7XYQ1 873 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 NOL4O94818 638 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 STAU1O95793 577 aaKnown RBP21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 DDX6P26196 483 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 MAGEA11P43364 429 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 SYKP43405 635 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 C4orf50Q6ZRC1 276 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 SLC9A9Q8IVB4 645 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 CMTM8Q8IZV2 173 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 STKLD1Q8NE28 680 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 BPIFB1Q8TDL5 484 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 TMEM174Q8WUU8 243 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 MSANTD3Q96H12 275 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 MMS19Q96T76 1030 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 DMAC2Q9NW81 257 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 MAGED2Q9UNF1 606 aaPredicted RBP21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 R4GN57 208 aa21.9■■□□□ 1.1
CHRNA3-207ENST00000559941 ATP2C2O75185 946 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 TACC1O75410 805 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 PDGFRBP09619 1106 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 NDUFA8P51970 172 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 MAPRE1Q15691 268 aaKnown RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 ZNF528Q3MIS6 628 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 CELF5Q8N6W0 485 aaKnown RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 PLEKHO2Q8TD55 490 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 TRMT2BQ96GJ1 504 aaKnown RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 MYRFLQ96LU7 910 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 SCAND2PQ9GZW5 306 aaPredicted RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 KCTD10Q9H3F6 313 aa21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 C8orf33Q9H7E9 229 aaPredicted RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 MAGEC2Q9UBF1 373 aaPredicted RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 UXTQ9UBK9 157 aaPredicted RBP21.89■■□□□ 1.09
CHRNA3-207ENST00000559941 SLC38A8A6NNN8 435 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 PDXKO00764 312 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 CCNE1P24864 410 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 PSMC1P62191 440 aaKnown RBP21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 PLCB2Q00722 1185 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 TRPC3Q13507 836 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 C1orf228Q6PIY5 440 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 ZC3H14Q6PJT7 736 aaKnown RBP21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 MAB21L3Q8N8X9 362 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 PARD3BQ8TEW8 1205 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 MRPS31Q92665 395 aaKnown RBP21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 ZFYVE19Q96K21 471 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 MRPL45Q9BRJ2 306 aaKnown RBP21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 SMG9Q9H0W8 520 aaKnown RBP21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 CRTAC1Q9NQ79 661 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 GVINP1Q7Z2Y8 2422 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 WDR87Q6ZQQ6 2873 aa21.88■■□□□ 1.09
CHRNA3-207ENST00000559941 EP300Q09472 2414 aaPredicted RBP21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 A0A1W2PQ27 194 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 A0A1W2PQ64 194 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 A0A1W2PQD8 194 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 TADA3O75528 432 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 RPN1P04843 607 aaKnown RBP21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 ATICP31939 592 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 GNL1P36915 607 aaPredicted RBP21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 AVPR1AP37288 418 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 CASP4P49662 377 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 KPNA1P52294 538 aaPredicted RBP21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 AP3M2P53677 418 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 TNNC1P63316 161 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 CSTF1Q05048 431 aaKnown RBP21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 WDR72Q3MJ13 1102 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 VSTM1Q6UX27 236 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 MON1AQ86VX9 555 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 SCN4BQ8IWT1 228 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 MYLPFQ96A32 169 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 CHRDQ9H2X0 955 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 SNX25Q9H3E2 840 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 LMAN1LQ9HAT1 526 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 THG1LQ9NWX6 298 aaKnown RBP21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 CFAP54Q96N23 3096 aa21.87■■□□□ 1.09
CHRNA3-207ENST00000559941 LMNAP02545 664 aaKnown RBP21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 MYL6P60660 151 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 CLDN10P78369 228 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 TXNDC8Q6A555 127 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 MAMSTRQ6ZN01 415 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 FSIP1Q8NA03 581 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 OR6B3Q8NGW1 331 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 MYCBPAPQ8TBZ2 947 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 SYAP1Q96A49 352 aaPredicted RBP21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 SPATA17Q96L03 361 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 CEP295NLQ96MC4 621 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 IER2Q9BTL4 223 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 XYLT2Q9H1B5 865 aa21.86■■□□□ 1.09
CHRNA3-207ENST00000559941 VRTNQ9H8Y1 702 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms