RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 FIZ1Q96SL8 496 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 PLIN2Q99541 437 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 BCO2Q9BYV7 579 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 EPC1Q9H2F5 836 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 C17orf75Q9HAS0 396 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TRPV4Q9HBA0 871 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 CYP4F11Q9HBI6 524 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 ZNF334Q9HCZ1 680 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 PARD6AQ9NPB6 346 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TRPV5Q9NQA5 729 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TOPORSQ9NS56 1045 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 SLC38A7Q9NVC3 462 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 C2orf42Q9NWW7 574 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 DNM3Q9UQ16 869 aa6.32□□□□□ -1.4
USP3-215ENST00000559771 TIMM13Q9Y5L4 95 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 NUP210Q8TEM1 1887 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 KMT2BQ9UMN6 2715 aaPredicted RBP6.32□□□□□ -1.4
USP3-215ENST00000559771 CEP250Q9BV73 2442 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 DENND4CQ5VZ89 1909 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 OBSL1O75147 1896 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 LACTBL1A8MY62 500 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 H7C4K7 107 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 LAD1O00515 517 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 PRRG1O14668 218 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 LAMTOR5O43504 91 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 KINO60870 393 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 LRG1P02750 347 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 CHRNB1P11230 501 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 HARSP12081 509 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 MCM4P33991 863 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 MAGEA9P43362 315 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 NCKAP1LP55160 1127 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 GRIN1Q05586 938 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 DMWDQ09019 674 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 NOLC1Q14978 699 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP3-215ENST00000559771 TEAD2Q15562 447 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ENOX2Q16206 610 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 KRT79Q5XKE5 535 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 ZPBP2Q6X784 338 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ZNF852Q6ZMS4 543 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 DTHD1Q6ZMT9 781 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 C20orf204Q6ZNR8 217 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 TTC9BQ8N6N2 239 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ZSCAN18Q8TBC5 510 aaPredicted RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 EPS8L1Q8TE68 723 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 SMARCD2Q92925 531 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ZSCAN31Q96LW9 406 aaPredicted RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 NELL2Q99435 816 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 TRMT61BQ9BVS5 477 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 IKZF4Q9H2S9 585 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 CHRDQ9H2X0 955 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ZFP14Q9HCL3 533 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 SH2B1Q9NRF2 756 aaPredicted RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 ZSCAN32Q9NX65 697 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 ANKFY1Q9P2R3 1169 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 AFF4Q9UHB7 1163 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 NOL7Q9UMY1 257 aaKnown RBP6.31□□□□□ -1.4
USP3-215ENST00000559771 YIPF1Q9Y548 306 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 PCDHGA2Q9Y5H1 932 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 SCN1AP35498 2009 aa6.31□□□□□ -1.4
USP3-215ENST00000559771 A0A0A0MRY4 1105 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 HEPACAM2A8MVW5 462 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 TISP43B9A030 160 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 SOAT2O75908 522 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PIGRP01833 764 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PLA2G4BP0C869 781 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 MYL4P12829 197 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PSMC3P17980 439 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 CYP3A5P20815 502 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 GDI1P31150 447 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 ELF1P32519 619 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 SOX9P48436 509 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 CDR1P51861 262 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 ZNF131P52739 623 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 SATB1Q01826 763 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 FCHO2Q0JRZ9 810 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 DUSP4Q13115 394 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 GPR17Q13304 367 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PUM1Q14671 1186 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP3-215ENST00000559771 SCARA3Q6AZY7 606 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 CENPPQ6IPU0 288 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 GAREM2Q75VX8 874 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PDZD4Q76G19 769 aaPredicted RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 DGLUCYQ7Z3D6 616 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 NLRP8Q86W28 1048 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 MFSD6LQ8IWD5 586 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 FAM184AQ8NB25 1140 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 OR10T2Q8NGX3 314 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 FAM3CQ92520 227 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms