RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TFAP2BQ92481 460 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ACTRT3Q9BYD9 372 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 TPSD1Q9BZJ3 242 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 PRDM13Q9H4Q3 707 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 SERHLQ9NQF3 203 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 PRDM11Q9NQV5 511 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 TBC1D30Q9Y2I9 924 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 TMX2Q9Y320 296 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 PCDHGB6Q9Y5F9 930 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ADGRA2Q96PE1 1338 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 hCG_1984214I3L0E3 225 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 KIAA0355O15063 1070 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 PPM1DO15297 605 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 FRS3O43559 492 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 SOAT2O75908 522 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 THP07101 528 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 ATXN1LP0C7T5 689 aaKnown RBP4.12□□□□□ -1.75
CASC4-210ENST00000559550 CXCR5P32302 372 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 VIPR2P41587 438 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 PTH2RP49190 550 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 CLK3P49761 638 aaKnown RBP4.12□□□□□ -1.75
CASC4-210ENST00000559550 SUMO3P55854 103 aaPredicted RBP4.12□□□□□ -1.75
CASC4-210ENST00000559550 FMO1Q01740 532 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 SLC13A2Q13183 592 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 TXNRD1Q16881 649 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 PRR16Q569H4 304 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 LMBRD2Q68DH5 695 aaPredicted RBP4.12□□□□□ -1.75
CASC4-210ENST00000559550 PEG10Q86TG7 708 aaKnown RBP4.12□□□□□ -1.75
CASC4-210ENST00000559550 OR56A3Q8NH54 315 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 FAM136AQ96C01 138 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 PDLIM2Q96JY6 352 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 MESP1Q9BRJ9 268 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 RIOX1Q9H6W3 641 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 DKK3Q9UBP4 350 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 SERTAD3Q9UJW9 196 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 TPCN1Q9ULQ1 816 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 SSX2IPQ9Y2D8 614 aa4.12□□□□□ -1.75
CASC4-210ENST00000559550 MRPS17Q9Y2R5 130 aaKnown RBP4.12□□□□□ -1.75
CASC4-210ENST00000559550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
CASC4-210ENST00000559550 PROB1E7EW31 1015 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 GOLIM4O00461 696 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 MPPED1O15442 326 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 MYF5P13349 255 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 BRAFP15056 766 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 PEX2P28328 305 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 PXNP49023 591 aaPredicted RBP4.11□□□□□ -1.75
CASC4-210ENST00000559550 RARRES1P49788 294 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 MAPK10P53779 464 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 CACNB3P54284 484 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 LOXL3P58215 753 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 FAM193AP78312 1265 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 ITIH3Q06033 890 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 EIF2B5Q13144 721 aaKnown RBP4.11□□□□□ -1.75
CASC4-210ENST00000559550 SEMA5AQ13591 1074 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 POLD3Q15054 466 aaPredicted RBP4.11□□□□□ -1.75
CASC4-210ENST00000559550 PTPRRQ15256 657 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 CNGA2Q16280 664 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 C3orf38Q5JPI3 329 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 ZNF362Q5T0B9 420 aaPredicted RBP4.11□□□□□ -1.75
CASC4-210ENST00000559550 DCAF12L1Q5VU92 463 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 KAZNQ674X7 775 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 DARS2Q6PI48 645 aaKnown RBP4.11□□□□□ -1.75
CASC4-210ENST00000559550 LAYNQ6UX15 382 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 MICU3Q86XE3 530 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 MPP5Q8N3R9 675 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 RAPGEF4Q8WZA2 1011 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 FKBP10Q96AY3 582 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 APIPQ96GX9 242 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 PGBD1Q96JS3 809 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 C8orf48Q96LL4 319 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 APOL5Q9BWW9 433 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 MS4A7Q9GZW8 240 aaPredicted RBP4.11□□□□□ -1.75
CASC4-210ENST00000559550 LRIT1Q9P2V4 623 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 ZNHIT2Q9UHR6 403 aa4.11□□□□□ -1.75
CASC4-210ENST00000559550 TRIM43BA6NCK2 446 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 ZAR1LA6NP61 321 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 LINC00473A8K010 186 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 MYO1CO00159 1063 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 MARCH6O60337 910 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 PCSK6P29122 969 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 PPIFP30405 207 aaKnown RBP4.1□□□□□ -1.75
CASC4-210ENST00000559550 NXPH1P58417 271 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 TBCCQ15814 346 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 EPHA10Q5JZY3 1008 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 ARHGAP40Q5TG30 622 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 RGS7BPQ6MZT1 257 aaPredicted RBP4.1□□□□□ -1.75
CASC4-210ENST00000559550 PPP4R4Q6NUP7 873 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 ZDHHC24Q6UX98 284 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 SESTD1Q86VW0 696 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 ADGRG3Q86Y34 549 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 SIMC1Q8NDZ2 872 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 RFKQ969G6 155 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 TRIM43Q96BQ3 446 aaPredicted RBP4.1□□□□□ -1.75
CASC4-210ENST00000559550 ZNF518BQ9C0D4 1074 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 CXorf36Q9H7Y0 433 aa4.1□□□□□ -1.75
CASC4-210ENST00000559550 DDX21Q9NR30 783 aaKnown RBP eCLIP4.1□□□□□ -1.75
CASC4-210ENST00000559550 IL17RBQ9NRM6 502 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms