RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LIN9Q5TKA1 542 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 TAF3Q5VWG9 929 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ARHGAP17Q68EM7 881 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 GPR153Q6NV75 609 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 FAM171BQ6P995 826 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 RNF19BQ6ZMZ0 732 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 RBM23Q86U06 439 aaKnown RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 FAM35AQ86V20 835 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 LRRTM3Q86VH5 581 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC47A2Q86VL8 602 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 VPS36Q86VN1 386 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNF677Q86XU0 584 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 MICALL1Q8N3F8 863 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 C12orf29Q8N999 325 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 OR8K1Q8NGG5 319 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNF461Q8TAF7 563 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 SPPL2BQ8TCT7 592 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 EPS8L1Q8TE68 723 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 SYN2Q92777 582 aaPredicted RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 CYFIP2Q96F07 1278 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 SMARCD1Q96GM5 515 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 PCED1BQ96HM7 432 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 FUBP3Q96I24 572 aaKnown RBP eCLIP7□□□□□ -1.29
CHRNA3-204ENST00000559002 PGLYRP2Q96PD5 576 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 DNAJC7Q99615 494 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 CDCA3Q99618 268 aaPredicted RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 PKMYT1Q99640 499 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 SEPT5Q99719 369 aaPredicted RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 LPIN3Q9BQK8 851 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNF518BQ9C0D4 1074 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 CYP4F11Q9HBI6 524 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ACP6Q9NPH0 428 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 KRT82Q9NSB4 513 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ABHD10Q9NUJ1 306 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 SEPT11Q9NVA2 429 aaKnown RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 TMLHEQ9NVH6 421 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 DPP7Q9UHL4 492 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 TSPAN16Q9UKR8 245 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 MAFFQ9ULX9 164 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 CEP83Q9Y592 693 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 PLXNA4Q9HCM2 1894 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 O00370 1275 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CLDN5O00501 218 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 PER2O15055 1255 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 TGM5O43548 720 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 NRDCO43847 1150 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CLASP2O75122 1294 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 MICAL2O94851 1124 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ABLIM3O94929 683 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CALCAP01258 141 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 SERPING1P05155 500 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 SPATA31D3P0C874 917 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 SETSIPP0DME0 302 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 SRGAP2BP0DMP2 458 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ATF2P15336 505 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 BDNFP23560 247 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ANXA13P27216 316 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 GRIK1P39086 918 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 TUFMP49411 452 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CLCN4P51793 760 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 BCAT1P54687 386 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 RPL10AP62906 217 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 BST2Q10589 180 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 DUSP4Q13115 394 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 PLD1Q13393 1074 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CNGA2Q16280 664 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 MEA1Q16626 185 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 DUSP6Q16828 381 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 MGAT5BQ3V5L5 792 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CFAP221Q4G0U5 840 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 TCEAL5Q5H9L2 206 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 E4F1Q66K89 784 aaPredicted RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 LLGL2Q6P1M3 1020 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 VSTM1Q6UX27 236 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 SPATA31D4Q6ZUB0 917 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC149Q6ZUS6 474 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 Q7L0L9 218 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ADGRD2Q7Z7M1 963 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 NOP9Q86U38 636 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 SCN4BQ8IWT1 228 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 FUKQ8N0W3 1084 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 DEFB123Q8N688 67 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ATAD1Q8NBU5 361 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 KREMEN2Q8NCW0 462 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNF606Q8WXB4 792 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 TFAP2BQ92481 460 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 NOX5Q96PH1 765 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 HNRNPABQ99729 332 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 B3GNT5Q9BYG0 378 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 DEF6Q9H4E7 631 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 PLEKHA4Q9H4M7 779 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 IGFLR1Q9H665 355 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 DMAP1Q9NPF5 467 aaPredicted RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 MAN1C1Q9NR34 630 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 AIPL1Q9NZN9 384 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 FBXW11Q9UKB1 542 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms