RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 MBD3L3A6NE82 208 aaPredicted RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 DRGXA6NNA5 263 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PRR5-ARHGAP8B1AHC4 643 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 B5MCH6 92 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 hCG_1984214I3L0E3 225 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 M0R3H8 397 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RAB27BO00194 218 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 LEFTY2O00292 366 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PODXLO00592 558 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PIP5K1BO14986 540 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 NPC1O15118 1278 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 FFAR2O15552 330 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 THAP12O43422 761 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 TLR5O60602 858 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 SKAP2O75563 359 aaPredicted RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 WDHD1O75717 1129 aaPredicted RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 RASSF9O75901 435 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 NUDT3O95989 172 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 AGR2O95994 175 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 GNAI2P04899 355 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 SRGNP10124 158 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 TXNP10599 105 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 GYS1P13807 737 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RPL17P18621 184 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 CR2P20023 1033 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 FDXRP22570 491 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 KLRC1P26715 233 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 GABRB3P28472 473 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MSX2P35548 267 aaPredicted RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 ZNF134P52741 427 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MC2RQ01718 297 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 BIRC3Q13489 604 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RAB32Q13637 225 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 KCNAB1Q14722 419 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 UBXN2BQ14CS0 331 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 POSTNQ15063 836 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RAB30Q15771 203 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PDCD2Q16342 344 aaPredicted RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 ATP2B3Q16720 1220 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PFKFB4Q16877 469 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 TIGD6Q17RP2 521 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 HSP90AB4PQ58FF6 505 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 C1QL3Q5VWW1 255 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 METRNLQ641Q3 311 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 LMBRD2Q68DH5 695 aaPredicted RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 LAIR1Q6GTX8 287 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PGBD2Q6P3X8 592 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 CRTC1Q6UUV9 634 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 SLC30A10Q6XR72 485 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MED25Q71SY5 747 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 POLNQ7Z5Q5 900 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PPP1R32Q7Z5V6 425 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 ZNF354CQ86Y25 554 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 ZNF280BQ86YH2 543 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PDSS2Q86YH6 399 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 FITM2Q8N6M3 262 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 FANCBQ8NB91 859 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 OR52N2Q8NGI0 321 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 BRI3BPQ8WY22 251 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RILPL2Q969X0 211 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 TBC1D20Q96BZ9 403 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MARS2Q96GW9 593 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 LRIG1Q96JA1 1093 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 ZC3H10Q96K80 434 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 SLC46A1Q96NT5 459 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 EIF2AK1Q9BQI3 630 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 SPATA5L1Q9BVQ7 753 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 TEX101Q9BY14 249 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 TTYH3Q9C0H2 523 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MYLK2Q9H1R3 596 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 AGO4Q9HCK5 861 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 ITM2CQ9NQX7 267 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 VPS45Q9NRW7 570 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RLIMQ9NVW2 624 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 ETAA1Q9NY74 926 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 DACT1Q9NYF0 836 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 RRN3Q9NYV6 651 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 PTGFRNQ9P2B2 879 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 HSFX1Q9UBD0 423 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 XPR1Q9UBH6 696 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 ZNF212Q9UDV6 495 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 ATP11BQ9Y2G3 1177 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MRPS17Q9Y2R5 130 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 TMX2Q9Y320 296 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 REXO2Q9Y3B8 237 aaKnown RBP1.96□□□□□ -2.1
USP3-209ENST00000558925 PLEKHM1Q9Y4G2 1056 aa1.96□□□□□ -2.1
USP3-209ENST00000558925 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 GOLGA6L3A6NEY3 463 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 CLCA1A8K7I4 914 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 IPO5O00410 1097 aaKnown RBP1.95□□□□□ -2.1
USP3-209ENST00000558925 POLRMTO00411 1230 aaKnown RBP1.95□□□□□ -2.1
USP3-209ENST00000558925 SYT5O00445 386 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 ZNF185O15231 689 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 ASNA1O43681 348 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 ZFPL1O95159 310 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 LMNAP02545 664 aaKnown RBP1.95□□□□□ -2.1
USP3-209ENST00000558925 A1BGP04217 495 aa1.95□□□□□ -2.1
USP3-209ENST00000558925 THP07101 528 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms