RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 EIF3DO15371 548 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 HUS1O60921 280 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 PPP6R2O75170 966 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 SOAT2O75908 522 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 UBE4BO95155 1302 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 YEATS4O95619 227 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 ITGB3P05106 788 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 HSP90AA1P07900 732 aaKnown RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 ATF6P18850 670 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 CD72P21854 359 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 GABRR2P28476 465 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 VIPR2P41587 438 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 ASIC1P78348 528 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 AMPD3Q01432 767 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 MYL7Q01449 175 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 FCHO2Q0JRZ9 810 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 BFSP1Q12934 665 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 PPP2R5DQ14738 602 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 AGERQ15109 404 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 NFE2Q16621 373 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 GPR158Q5T848 1215 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 RIF1Q5UIP0 2472 aaKnown RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 WSCD1Q658N2 575 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 GPD1LQ8N335 351 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 C1orf127Q8N9H9 656 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 LINC00301Q8NCQ3 95 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 SPATA18Q8TC71 538 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 CSGALNACT1Q8TDX6 532 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 LEO1Q8WVC0 666 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 CLDN23Q96B33 292 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 ZSWIM3Q96MP5 696 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 LPIN3Q9BQK8 851 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 CBWD1Q9BRT8 395 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 LRRC3Q9BY71 257 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 FGFBP2Q9BYJ0 223 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 IKZF4Q9H2S9 585 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 CHRDQ9H2X0 955 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF334Q9HCZ1 680 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 PRMT8Q9NR22 394 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 OBP2AQ9NY56 170 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 ABI2Q9NYB9 513 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 NDRG2Q9UN36 371 aaKnown RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 MTF2Q9Y483 593 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-205ENST00000558700 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 CACNA1IQ9P0X4 2223 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF638Q14966 1978 aaKnown RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 CHADO15335 359 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 HRO43593 1189 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 CUTAO60888 179 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 ABL1P00519 1130 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 TNNC2P02585 160 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 HAPLN1P10915 354 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 PCSK1P29120 753 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 KPNA1P52294 538 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 MLLT6P55198 1093 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 WNT7BP56706 349 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 LRRC32Q14392 662 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 SURF1Q15526 300 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 ARHGAP29Q52LW3 1261 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 STXBP5Q5T5C0 1151 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 GAREM2Q75VX8 874 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 DNAJB7Q7Z6W7 309 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 ADGRF2Q8IZF7 708 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 MAML2Q8IZL2 1156 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 TMEM86AQ8N2M4 240 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 IQUBQ8NA54 791 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 FAM3CQ92520 227 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 SNX21Q969T3 373 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 DHX58Q96C10 678 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 ANKRD36BP1Q96IX9 119 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 FAM126AQ9BYI3 521 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 PANK2Q9BZ23 570 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 TRIM9Q9C026 710 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 MTMR12Q9C0I1 747 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 C8orf33Q9H7E9 229 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 KIF9Q9HAQ2 790 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 KBTBD4Q9NVX7 518 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 L1RE1Q9UN81 338 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 AGAP1Q9UPQ3 857 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 PCDHB5Q9Y5E4 795 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 USP34Q70CQ2 3546 aa8.66□□□□□ -1.02
TRAF3-205ENST00000558700 HELZP42694 1942 aaKnown RBP8.66□□□□□ -1.02
TRAF3-205ENST00000558700 PTPRZ1P23471 2315 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PTPRDP23468 1912 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 GOLGA8IPA6NC78 632 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 GOLGA8JA6NMD2 632 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 ARNTLO00327 626 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PRMT3O60678 531 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PRPF6O94906 941 aaKnown RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PRAMEF12O95522 483 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 KRT19P08727 400 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 CSH1P0DML2 217 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 CSH2P0DML3 217 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 DDX6P26196 483 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms