RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ORC3Q9UBD5 711 aaPredicted RBP3.66□□□□□ -1.82
HERC1-203ENST00000558532 RRP15Q9Y3B9 282 aaKnown RBP3.66□□□□□ -1.82
HERC1-203ENST00000558532 PCDHA13Q9Y5I0 950 aa3.66□□□□□ -1.82
HERC1-203ENST00000558532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.66□□□□□ -1.82
HERC1-203ENST00000558532 MRFAP1Q9Y605 127 aa3.66□□□□□ -1.82
HERC1-203ENST00000558532 SPATA31D1Q6ZQQ2 1576 aa3.66□□□□□ -1.82
HERC1-203ENST00000558532 NALCNQ8IZF0 1738 aa3.66□□□□□ -1.82
HERC1-203ENST00000558532 SOS1Q07889 1333 aaPredicted RBP3.66□□□□□ -1.82
HERC1-203ENST00000558532 RPGRIP1LQ68CZ1 1315 aa3.66□□□□□ -1.82
HERC1-203ENST00000558532 USP42Q9H9J4 1324 aaKnown RBP3.66□□□□□ -1.82
HERC1-203ENST00000558532 C3P01024 1663 aa3.65□□□□□ -1.82
HERC1-203ENST00000558532 JCADQ9P266 1359 aa3.65□□□□□ -1.82
HERC1-203ENST00000558532 SIGLEC1Q9BZZ2 1709 aa3.65□□□□□ -1.82
HERC1-203ENST00000558532 GAGE12BA1L429 117 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 GRID2IPA4D2P6 1211 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 GAGE12HA6NDE8 117 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 USP27XA6NNY8 438 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 EFCAB8A8MWE9 144 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 SGTAO43765 313 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 ABHD16AO95870 558 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 POMCP01189 267 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 CCDC172P0C7W6 258 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 LAG3P18627 525 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 GCSHP23434 173 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 OAS2P29728 719 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 SLC6A4P31645 630 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 GTF2A1P52655 376 aaPredicted RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 ADKP55263 362 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 CTXN1P60606 82 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 OCA2Q04671 838 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 ST3GAL1Q11201 340 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 UBXN2BQ14CS0 331 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 TPD52L1Q16890 204 aaPredicted RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 ERCC6LQ2NKX8 1250 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 ANO6Q4KMQ2 910 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 EFCAB2Q5VUJ9 269 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 TMCO3Q6UWJ1 677 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 RSRC2Q7L4I2 434 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 LUZP1Q86V48 1076 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 CMTR2Q8IYT2 770 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 ULK2Q8IYT8 1036 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 SYNE4Q8N205 404 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 SPC24Q8NBT2 197 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 CCDC150Q8NCX0 1101 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 NEK11Q8NG66 645 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 PROKR1Q8TCW9 393 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 KAT5Q92993 513 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 HDAC10Q969S8 669 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 MRGPRX4Q96LA9 322 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 BPIFA3Q9BQP9 254 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 MRIQ9BWK5 157 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 CHMP4AQ9BY43 222 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 ALDH8A1Q9H2A2 487 aaPredicted RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 SLC12A5Q9H2X9 1139 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 TDP1Q9NUW8 608 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 CLIP2Q9UDT6 1046 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 SAP30BPQ9UHR5 308 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 NRBP1Q9UHY1 535 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 LCMT1Q9UIC8 334 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 JRKLQ9Y4A0 524 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 SPEF1Q9Y4P9 236 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 CEP83Q9Y592 693 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 PCDHB1Q9Y5F3 818 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 LRRFIP2Q9Y608 721 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 AKAP12Q02952 1782 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 TMEM131LA2VDJ0 1609 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 EVC2Q86UK5 1308 aa3.65□□□□□ -1.83
HERC1-203ENST00000558532 ATXN2Q99700 1313 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 MAP2P11137 1827 aaKnown RBP3.65□□□□□ -1.83
HERC1-203ENST00000558532 TCRBV7S2A1N4TA0A589 114 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 CCDC151A5D8V7 595 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 CCDC69A6NI79 296 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 CTAGE5O15320 804 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 CCP110O43303 1012 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 FIBPO43427 364 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 HMMRO75330 724 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 NDUFA10O95299 355 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 CFIP05156 583 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 SBK3P0C264 359 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 SPATA31D3P0C874 917 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 SKILP12757 684 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 BMPR1AP36894 532 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 HMGA2P52926 109 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 AK2P54819 239 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 ZNF280AP59817 542 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 EXOSC10Q01780 885 aaKnown RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 SATB1Q01826 763 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 DSC2Q02487 901 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TLE1Q04724 770 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 DPTQ07507 201 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 LMOD3Q0VAK6 560 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TRDNQ13061 729 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TWISTNBQ3B726 338 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 UAP1L1Q3KQV9 507 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TTC31Q49AM3 519 aaPredicted RBP3.64□□□□□ -1.83
HERC1-203ENST00000558532 TIGD2Q4W5G0 525 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 ARHGAP29Q52LW3 1261 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 LY6G5CQ5SRR4 150 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 TMEM240Q5SV17 173 aa3.64□□□□□ -1.83
HERC1-203ENST00000558532 VPS53Q5VIR6 699 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms