RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 WSCD1Q658N2 575 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 PKD1L2Q7Z442 2459 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 SYT2Q8N9I0 419 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 FAM184AQ8NB25 1140 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 RIN3Q8TB24 985 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 EZH1Q92800 747 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 PI4K2AQ9BTU6 479 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 TMEM206Q9H813 350 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 PCNX2A6NKB5 2137 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 ANO9A1A5B4 782 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 ADRB2P07550 413 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 SCP2P22307 547 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 PI4KAP42356 2102 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 DPP6P42658 865 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 NEK4P51957 841 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 NCKAP1LP55160 1127 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 ZNF77Q15935 545 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 RASSF3Q86WH2 238 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 HDDC3Q8N4P3 179 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 KCTD17Q8N5Z5 321 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 FSIP1Q8NA03 581 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 FBXO18Q8NFZ0 1043 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 USP33Q8TEY7 942 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 WDFY3Q8IZQ1 3526 aa19.2■□□□□ 0.66
TSPAN3-204ENST00000558394 ANKRD11Q6UB99 2663 aaPredicted RBP19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 H0Y626 953 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 K7ENM7 598 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 TRIM16O95361 564 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 NFATC1O95644 943 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 PRPHP41219 470 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 GPR15P49685 360 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 SIM1P81133 766 aaPredicted RBP19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 EML3Q32P44 896 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 SV2CQ496J9 727 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 CCDC33Q8N5R6 958 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 STKLD1Q8NE28 680 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 MDGA1Q8NFP4 955 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 PLIN2Q99541 437 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 ASB7Q9H672 318 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 DPP3Q9NY33 737 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 BCCIPQ9P287 314 aaKnown RBP eCLIP19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 CPSF3Q9UKF6 684 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 KLK13Q9UKR3 277 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 MMP17Q9ULZ9 603 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 C2CD2Q9Y426 696 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
TSPAN3-204ENST00000558394 A0A0B4J269 797 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 SPAARA0A1B0GVQ0 90 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 KPNA7A9QM74 516 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 TULP1O00294 542 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 TNFRSF10BO14763 440 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 FAM189A1O60320 539 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 PLA2G4BP0C869 781 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 ENGP17813 658 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 USP4Q13107 963 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 BYSLQ13895 437 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 KCNB1Q14721 858 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 CRY1Q16526 586 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 SDHAF4Q5VUM1 108 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 ARMCX6Q7L4S7 300 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 SYT12Q8IV01 421 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 EFCAB13Q8IY85 973 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 WHAMMQ8TF30 809 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 CYP2S1Q96SQ9 504 aa19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 MMTAG2Q9BU76 263 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-204ENST00000558394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 NPHP3-ACAD11A0A0J9YXS1 232 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 PIGRP01833 764 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 CFIP05156 583 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 PDE6CP51160 858 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 SLC12A3P55017 1021 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 MRPS21P82921 87 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 DDR2Q16832 855 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 CCDC83Q8IWF9 413 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 TMEFF1Q8IYR6 380 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 MYCT1Q8N699 235 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 SH3RF2Q8TEC5 729 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 TRMT2BQ96GJ1 504 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 CCSER1Q9C0I3 900 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 POLMQ9NP87 494 aaPredicted RBP19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 ODF2LQ9ULJ1 636 aa19.17■□□□□ 0.66
TSPAN3-204ENST00000558394 AKAP13Q12802 2813 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 GON4LQ3T8J9 2241 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 MYMKA6NI61 221 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 K7EQS6 105 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 NOL4O94818 638 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 FAM13AO94988 1023 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 SEC24BO95487 1268 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 HDCP19113 662 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 ABCD1P33897 745 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 ACOT2P49753 483 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 HYIQ5T013 277 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 LYSMD4Q5XG99 296 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 ADALQ6DHV7 355 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 PGBD3Q8N328 593 aa19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 ARL14EPQ8N8R7 260 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-204ENST00000558394 LEO1Q8WVC0 666 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms