RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 HOOK3Q86VS8 718 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 RCOR2Q8IZ40 523 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 GRK7Q8WTQ7 553 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 TMEM40Q8WWA1 233 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 SLCO2A1Q92959 643 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 RBM41Q96IZ5 413 aaKnown RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 MRPL45Q9BRJ2 306 aaKnown RBP11.13□□□□□ -0.63
TPM1-210ENST00000558264 ZNF518BQ9C0D4 1074 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 ASB7Q9H672 318 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 WHRNQ9P202 907 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 TSPAN16Q9UKR8 245 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM1-210ENST00000558264 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
TPM1-210ENST00000558264 hCG_1818297A0A087WSY0 165 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 CYP2C9P11712 490 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 CDKN2BP42772 138 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 EIF3BP55884 814 aaKnown RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 BYSLQ13895 437 aaKnown RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 PIGHQ14442 188 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 SLMAPQ14BN4 828 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 C15orf59Q2T9L4 293 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 GOLGA2P5Q9HBQ8 144 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 NEU2Q9Y3R4 380 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 COL1A2P08123 1366 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 SIGLEC16A6NMB1 481 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 E5RJQ4 531 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 GOLGA8MH3BSY2 632 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 IGF2BP3O00425 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM1-210ENST00000558264 PAEPP09466 180 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ITIH2P19823 946 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 CETN2P41208 172 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 GPD2P43304 727 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ARSEP51690 589 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 RBP5P82980 135 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 POU5F1BQ06416 359 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 GOLGA7BQ2TAP0 167 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 OR6B2Q6IFH4 312 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ZNF467Q7Z7K2 595 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 SRLQ86TD4 932 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 KAT2BQ92831 832 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ADAMTS10Q9H324 1103 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TBK1Q9UHD2 729 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 SGK1O00141 431 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 RASGRF2O14827 1237 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TREHO43280 583 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 BANF1O75531 89 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TJP3O95049 919 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 MYL3P08590 195 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 CREB1P16220 341 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 IBSPP21815 317 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 GBP1P32455 592 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 GDF10P55107 478 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 HUNKP57058 714 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ATP11AP98196 1134 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 GPS1Q13098 491 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TFDP3Q5H9I0 405 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 SYCP2LQ5T4T6 812 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 PPP1R26Q5T8A7 1209 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 CST9Q5W186 159 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 PPP1R2P3Q6NXS1 205 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 NLRP14Q86W24 1093 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 C10orf67Q8IYJ2 551 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ARFGAP2Q8N6H7 521 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TLCD1Q96CP7 247 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TRAIPQ9BWF2 469 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 CALN1Q9BXU9 219 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 TRIM6Q9C030 488 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 EPN3Q9H201 632 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 LHX5Q9H2C1 402 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 DPEP3Q9H4B8 488 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 PIN4Q9Y237 131 aaKnown RBP11.12□□□□□ -0.63
TPM1-210ENST00000558264 SLC45A1Q9Y2W3 748 aa11.12□□□□□ -0.63
TPM1-210ENST00000558264 SCN1AP35498 2009 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 C3orf70A6NLC5 250 aaPredicted RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 CST8O60676 142 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 GPR32O75388 356 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 MAP3K6O95382 1288 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 KLRC2P26717 231 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 MIPP30301 263 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 GAD2Q05329 585 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 AUHQ13825 339 aaKnown RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 FASTKD3Q14CZ7 662 aaKnown RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 C7orf31Q8N865 590 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 MGARPQ8TDB4 240 aa11.11□□□□□ -0.63
TPM1-210ENST00000558264 ZNF473Q8WTR7 871 aaKnown RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
TPM1-210ENST00000558264 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms