RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DHX58Q96C10 678 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 MYRFLQ96LU7 910 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 CEP295NLQ96MC4 621 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 FNBP1Q96RU3 617 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 FAM83CQ9BQN1 747 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 SMG9Q9H0W8 520 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 HSPBP1Q9NZL4 362 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 MAGEC2Q9UBF1 373 aaPredicted RBP14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 NUP210Q8TEM1 1887 aaPredicted RBP14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 TSC2P49815 1807 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 NOL4O94818 638 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 USP17L7P0C7H9 530 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 HOXA6P31267 233 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 MAGEA11P43364 429 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 WNT7BP56706 349 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 SIM2Q14190 667 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 ZNF268Q14587 947 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 FAM26FQ5R3K3 315 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 ATL3Q6DD88 541 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 TXNDC11Q6PKC3 985 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 VSTM1Q6UX27 236 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 PRR23BQ6ZRT6 265 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 TMEM150AQ86TG1 271 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 LONP2Q86WA8 852 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 WDR49Q8IV35 697 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 SCN4BQ8IWT1 228 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 CXorf38Q8TB03 319 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 USP13Q92995 863 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 MMS19Q96T76 1030 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 C7orf25Q9BPX7 421 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 FGFBP2Q9BYJ0 223 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 RBM12Q9NTZ6 932 aaKnown RBP14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 FAM13BQ9NYF5 915 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 DLL3Q9NYJ7 618 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 CGNQ9P2M7 1197 aaKnown RBP14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 SIX4Q9UIU6 781 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 CDH9Q9ULB4 789 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 USP18Q9UMW8 372 aa14.58□□□□□ -0.08
SNRPA1-204ENST00000558020 DCHS1Q96JQ0 3298 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 TRAV19A0A0A6YYK7 116 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 FOXD2O60548 495 aaPredicted RBP14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 LRP3O75074 770 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 CKMP06732 381 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 RETP07949 1114 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 FAM163BP0C2L3 166 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 TNNI1P19237 187 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 NR1H3Q13133 447 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 CCINQ13939 588 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 GAS6Q14393 721 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 E2F4Q16254 413 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 SNRNP35Q16560 246 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 RSPO4Q2I0M5 234 aaPredicted RBP14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 FAM171BQ6P995 826 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 CBWD2Q8IUF1 395 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 SNX21Q969T3 373 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 SNX25Q9H3E2 840 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 EBF3Q9H4W6 596 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 CFAP45Q9UL16 551 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 COL4A2P08572 1712 aa14.57□□□□□ -0.08
SNRPA1-204ENST00000558020 CHURC1-FNTBB4DL54 471 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 TRDMT1O14717 391 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 POLR2DO15514 142 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 DLATP10515 647 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 DRD1P21728 446 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 ANXA13P27216 316 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 GNL1P36915 607 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 GRIK1P39086 918 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 ME1P48163 572 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 PPP3CCP48454 512 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 FNTBP49356 437 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 GPR15P49685 360 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 FAM160A1Q05DH4 1040 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 TMEM196Q5HYL7 178 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 SDHAF4Q5VUM1 108 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 CEP68Q76N32 757 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 EPM2AIP1Q7L775 607 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 TRAPPC11Q7Z392 1133 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 CPA6Q8N4T0 437 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 XXYLT1Q8NBI6 393 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 RDH13Q8NBN7 331 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 OR5B17Q8NGF7 314 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 CCDC26Q8TAB7 109 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 ATP2A3Q93084 1043 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 HPS3Q969F9 1004 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 SPATA17Q96L03 361 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 PKMYT1Q99640 499 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 SYT15Q9BQS2 421 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 TRPC7Q9HCX4 862 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 AGPAT3Q9NRZ7 376 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 CDV3Q9UKY7 258 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 CCL26Q9Y258 94 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 UBE4BO95155 1302 aa14.56□□□□□ -0.08
SNRPA1-204ENST00000558020 GPR179Q6PRD1 2367 aa14.55□□□□□ -0.08
SNRPA1-204ENST00000558020 PVALEFA0A1B0GWK0 134 aa14.55□□□□□ -0.08
SNRPA1-204ENST00000558020 PDGFRBP09619 1106 aa14.55□□□□□ -0.08
SNRPA1-204ENST00000558020 ZSCAN22P10073 491 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-204ENST00000558020 PFKLP17858 780 aa14.55□□□□□ -0.08
SNRPA1-204ENST00000558020 HDCP19113 662 aa14.55□□□□□ -0.08
SNRPA1-204ENST00000558020 KCNA4P22459 653 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms