RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SLC2A14Q8TDB8 520 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 CYFIP2Q96F07 1278 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 RHOBTB2Q9BYZ6 727 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 CRISPLD1Q9H336 500 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 ATP8B3O60423 1300 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 CYP26A1O43174 497 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 C8AP07357 584 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 VDRP11473 427 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 BDNFP23560 247 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 CYP2F1P24903 491 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 ADORA2BP29275 332 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 STAT1P42224 750 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 ZNF75DP51815 510 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 KCNC3Q14003 757 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 SGO2Q562F6 1265 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 SPECC1LQ69YQ0 1117 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 VSTM4Q8IW00 320 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 TCEAL8Q8IYN2 117 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 FAM71AQ8IYT1 594 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 FUBP3Q96I24 572 aaKnown RBP eCLIP22.59■■□□□ 1.21
CASC4-204ENST00000557945 ABCB6Q9NP58 842 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 DZANK1Q9NVP4 752 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 KIAA1257Q9ULG3 409 aa22.59■■□□□ 1.21
CASC4-204ENST00000557945 ITIH6Q6UXX5 1313 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 GOLGA6L3A6NEY3 463 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 JAM2P57087 298 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 CFAP221Q4G0U5 840 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 PPM1LQ5SGD2 360 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 FAM35AQ86V20 835 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 GPIHBP1Q8IV16 184 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 FUKQ8N0W3 1084 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 HDAC7Q8WUI4 952 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 CPLX3Q8WVH0 158 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 PABPC5Q96DU9 382 aaKnown RBP22.58■■□□□ 1.21
CASC4-204ENST00000557945 ZNF518BQ9C0D4 1074 aa22.58■■□□□ 1.21
CASC4-204ENST00000557945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.58■■□□□ 1.211e-6■□□□□ 9.9
CASC4-204ENST00000557945 SOAT2O75908 522 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 GFPT2O94808 682 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 HAPLN1P10915 354 aaPredicted RBP22.57■■□□□ 1.2
CASC4-204ENST00000557945 BRD2P25440 801 aaKnown RBP22.57■■□□□ 1.2
CASC4-204ENST00000557945 GNA15P30679 374 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 SOX5P35711 763 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 TUFMP49411 452 aaKnown RBP22.57■■□□□ 1.2
CASC4-204ENST00000557945 PTK2Q05397 1052 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 CTC1Q2NKJ3 1217 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 FIGNQ5HY92 759 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 PPP1R26Q5T8A7 1209 aaPredicted RBP22.57■■□□□ 1.2
CASC4-204ENST00000557945 TMEM184AQ6ZMB5 413 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 SCN4BQ8IWT1 228 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 MAFAQ8NHW3 353 aaPredicted RBP22.57■■□□□ 1.2
CASC4-204ENST00000557945 TFAP2BQ92481 460 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 HNRNPABQ99729 332 aaKnown RBP22.57■■□□□ 1.2
CASC4-204ENST00000557945 EDEM3Q9BZQ6 932 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 ACP6Q9NPH0 428 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 YIPF1Q9Y548 306 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 INSL5Q9Y5Q6 135 aa22.57■■□□□ 1.2
CASC4-204ENST00000557945 THAP12O43422 761 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 ZMYND10O75800 440 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 ALDH1A3P47895 512 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 BPIFB4P59827 614 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 ARHGAP17Q68EM7 881 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 SMYD5Q6GMV2 418 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 PAQR9Q6ZVX9 377 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 C12orf76Q8N812 135 aaPredicted RBP22.56■■□□□ 1.2
CASC4-204ENST00000557945 IQCDQ96DY2 449 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 TTYH3Q9C0H2 523 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 KRT82Q9NSB4 513 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 HSFX1Q9UBD0 423 aa22.56■■□□□ 1.2
CASC4-204ENST00000557945 RFPL2O75678 378 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 AP1G2O75843 785 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 LRG1P02750 347 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 FAM200BP0CF97 657 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 CLCN1P35523 988 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 GRIK1P39086 918 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 MAGEA11P43364 429 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 ARID5AQ03989 594 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 TWF1Q12792 350 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 GOLGA7BQ2TAP0 167 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 ANKRD54Q6NXT1 300 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 VSTM1Q6UX27 236 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 TMC6Q7Z403 805 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 SLC47A2Q86VL8 602 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 ZNF397Q8NF99 534 aaPredicted RBP22.55■■□□□ 1.2
CASC4-204ENST00000557945 BAP1Q92560 729 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 SMARCD1Q96GM5 515 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 MRFAP1L1Q96HT8 127 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 APOL5Q9BWW9 433 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 SFXN1Q9H9B4 322 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 HESX1Q9UBX0 185 aa22.55■■□□□ 1.2
CASC4-204ENST00000557945 A0A1W2PQJ5 194 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 LRRC53A6NM62 1247 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 O00370 1275 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 CCL16O15467 120 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 MED7O43513 233 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 TBX10O75333 385 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 SSTR3P32745 418 aaPredicted RBP22.54■■□□□ 1.2
CASC4-204ENST00000557945 GPR15P49685 360 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 CACNA2D1P54289 1103 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 RPL10AP62906 217 aaKnown RBP22.54■■□□□ 1.2
CASC4-204ENST00000557945 DLX2Q07687 328 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms