RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TWNKQ96RR1 684 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 MMS19Q96T76 1030 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 PSMB7Q99436 277 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 BCO2Q9BYV7 579 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 IMPG2Q9BZV3 1241 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 SENP6Q9GZR1 1112 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 AGO3Q9H9G7 860 aaKnown RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 DPP3Q9NY33 737 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 SMARCAL1Q9NZC9 954 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 CNTN3Q9P232 1028 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 TUBGCP4Q9UGJ1 667 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 AGAP1Q9UPQ3 857 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 PIN4Q9Y237 131 aaKnown RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 DERAQ9Y315 318 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 HYOU1Q9Y4L1 999 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 TRPV2Q9Y5S1 764 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 EVPLQ92817 2033 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 SHISA8B8ZZ34 492 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 THAP12O43422 761 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 KIF4AO95239 1232 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 CTSHP09668 335 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ARAFP10398 606 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 TCP1P17987 556 aaKnown RBP7.85□□□□□ -1.15
SPG11-204ENST00000557866 BRD2P25440 801 aaKnown RBP7.85□□□□□ -1.15
SPG11-204ENST00000557866 YY1P25490 414 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ATICP31939 592 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 EPHA4P54764 986 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 HADHBP55084 474 aaKnown RBP7.85□□□□□ -1.15
SPG11-204ENST00000557866 NOMO3P69849 1222 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 RBP5P82980 135 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 PTP4A2Q12974 167 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 IFI16Q16666 785 aaKnown RBP7.85□□□□□ -1.15
SPG11-204ENST00000557866 WDR72Q3MJ13 1102 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ZNF394Q53GI3 561 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ZNF667Q5HYK9 610 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 TEX35Q5T0J7 233 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 LLGL2Q6P1M3 1020 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 SLCO4C1Q6ZQN7 724 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 MON1BQ7L1V2 547 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ZNF572Q7Z3I7 529 aaPredicted RBP7.85□□□□□ -1.15
SPG11-204ENST00000557866 APBB1IPQ7Z5R6 666 aaPredicted RBP7.85□□□□□ -1.15
SPG11-204ENST00000557866 NT5DC4Q86YG4 428 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 CPNE8Q86YQ8 564 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 PASD1Q8IV76 773 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 MCOLN2Q8IZK6 566 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 WDTC1Q8N5D0 677 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ZNF606Q8WXB4 792 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 GOLGA1Q92805 767 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 HPDLQ96IR7 371 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 FAXDC2Q96IV6 333 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 MS4A14Q96JA4 679 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 APOL6Q9BWW8 343 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ELOVL4Q9GZR5 314 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ERVK-5Q9HDB9 667 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 EHD2Q9NZN4 543 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 KLK14Q9P0G3 267 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 HMGXB4Q9UGU5 601 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 GTF3C4Q9UKN8 822 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ITGA11Q9UKX5 1188 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 ST3GAL5Q9UNP4 418 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 IPPQ9Y573 584 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 NME7Q9Y5B8 376 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 CENPFP49454 3210 aa7.85□□□□□ -1.15
SPG11-204ENST00000557866 SCN10AQ9Y5Y9 1956 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 MGAMO43451 1857 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 SMIM28A0A1B0GU29 152 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CTAGE15A4D2H0 777 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 MEIS3P2A8K0S8 358 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 KHNYNO15037 678 aaKnown RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 DDX3YO15523 660 aaKnown RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 CILPO75339 1184 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RPS6KA5O75582 802 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CLSTN1O94985 981 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CTAGE8P0CG41 777 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 FAM157BP0CG42 384 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 KCNE1P15382 129 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 H2AFXP16104 143 aaPredicted RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 THPOP40225 353 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 DNA2P51530 1060 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 ACLYP53396 1101 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RAD23BP54727 409 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RBM10P98175 930 aaKnown RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 SOX4Q06945 474 aaPredicted RBP7.84□□□□□ -1.15
SPG11-204ENST00000557866 ORC1Q13415 861 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 ITGA7Q13683 1181 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RPS6KA1Q15418 735 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 PTGISQ16647 500 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 C2CD6Q53TS8 623 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 FAM26DQ5JW98 314 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 GLRA4Q5JXX5 417 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 SAMD5Q5TGI4 173 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 DENND1BQ6P3S1 775 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 TRIM72Q6ZMU5 477 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 PHLDB2Q86SQ0 1253 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 DAAM2Q86T65 1068 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RNF180Q86T96 592 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CTAGE6Q86UF2 777 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 CTAGE4Q8IX94 777 aa7.84□□□□□ -1.15
SPG11-204ENST00000557866 RHOT2Q8IXI1 618 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms