RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 VPS11Q9H270 941 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 A6NJR5 290 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 GSC2O15499 205 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 WEE2P0C1S8 567 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 FAAP100Q0VG06 881 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 COBLL1Q53SF7 1204 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 SH2D4BQ5SQS7 431 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 POLNQ7Z5Q5 900 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 NDUFAF2Q8N183 169 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 EMC1Q8N766 993 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 GSTCDQ8NEC7 633 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 KREMEN1Q96MU8 473 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 EPAS1Q99814 870 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 ACSS2Q9NR19 701 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 RAB6BQ9NRW1 208 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 F8VP50 259 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 PIK3CDO00329 1044 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 FAM155BO75949 473 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 UBAP2LQ14157 1087 aaKnown RBP11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 SV2AQ7L0J3 742 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 CDR2LQ86X02 465 aaPredicted RBP11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 NME8Q8N427 588 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 ICA1LQ8NDH6 482 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 NGRNQ9NPE2 291 aaKnown RBP11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 APOBEC2Q9Y235 224 aaKnown RBP11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 LZTS1Q9Y250 596 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 STARD13Q9Y3M8 1113 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
CCDC85C-207ENST00000557769 MEIS2O14770 477 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 SEC24DO94855 1032 aaPredicted RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 MX2P20592 715 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 PPP4CP60510 307 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 RPL7AP62424 266 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 KCTD21Q4G0X4 260 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 CDC42EP5Q6NZY7 148 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 RIPOR1Q6ZS17 1223 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 OPTNQ96CV9 577 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 DDX60LQ5H9U9 1706 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 AVILO75366 819 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 RNF8O76064 485 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 ADRB2P07550 413 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 EIF3EP60228 445 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 PRAMEP78395 509 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 PDK4Q16654 411 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 HADHQ16836 314 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 DACT2Q5SW24 774 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 MFSD5Q6N075 450 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 C16orf46Q6P387 395 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 NLRX1Q86UT6 975 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 DEPTORQ8TB45 409 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 ACTL9Q8TC94 416 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 GMLQ99445 158 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 HERPUD2Q9BSE4 406 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 TUBB6Q9BUF5 446 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 KCNMB3Q9NPA1 279 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 AAASQ9NRG9 546 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 KRT37O76014 449 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 OTUD4Q01804 1114 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 CNGA3Q16281 694 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 ETNPPLQ8TBG4 499 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 DEPDC1BQ8WUY9 529 aa11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
CCDC85C-207ENST00000557769 GTPBP10A4D1E9 387 aaKnown RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 ZNF200P98182 395 aaPredicted RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 KLHL38Q2WGJ6 581 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 CDCA2Q69YH5 1023 aaPredicted RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 PODNQ7Z5L7 613 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 PCGF5Q86SE9 256 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 WDR75Q8IWA0 830 aaKnown RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 E2F7Q96AV8 911 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 OXNAD1Q96HP4 312 aaPredicted RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 TUBGCP5Q96RT8 1024 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 PDP2Q9P2J9 529 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 MTO1Q9Y2Z2 717 aaKnown RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 GOLGA8QA0A0J9YX86 632 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 GOLGA8OA6NCC3 632 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 CYB561D2O14569 222 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 FESP07332 822 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 FAM200BP0CF97 657 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 RBP3P10745 1247 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 BPIFB4P59827 614 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 PTK6Q13882 451 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 CGB2Q6NT52 195 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 C1orf186Q6ZWK4 172 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 MCOLN2Q8IZK6 566 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 INPP5DQ92835 1189 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 GRIP2Q9C0E4 1043 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 LRRC19Q9H756 370 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 MRPL11Q9Y3B7 192 aaKnown RBP11.4□□□□□ -0.58
CCDC85C-207ENST00000557769 HLA-DRAP01903 254 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms