RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SPATA18Q8TC71 538 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 BSNDQ8WZ55 320 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 MCEEQ96PE7 176 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 MRPL1Q9BYD6 325 aaKnown RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 AHSPQ9NZD4 102 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 H2AFY2Q9P0M6 372 aaPredicted RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 DNPEPQ9ULA0 475 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 WDR91A4D1P6 747 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 VWA5AO00534 786 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 MYL2P10916 166 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 POTEAQ6S8J7 498 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 ZC3H18Q86VM9 953 aaKnown RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 PIP4K2CQ8TBX8 421 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 PDGFCQ9NRA1 345 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 DEPDC5O75140 1603 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 FAM170AA1A519 330 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 H3BRB1 525 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CYB561D2O14569 222 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 SGCGQ13326 291 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CUL2Q13617 745 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 AGAP9Q5VTM2 703 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CAMKK2Q96RR4 588 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TUT1Q9H6E5 874 aaKnown RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TBC1D12O60347 775 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 VPS26AO75436 327 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ALOX15P16050 662 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 KLRC2P26717 231 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 DSG3P32926 999 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ARFIP2P53365 341 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TMEM62Q0P6H9 643 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 PCDHB5Q9Y5E4 795 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 FKTNO75072 461 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 PTGER2P43116 358 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 GRAMD1BQ3KR37 738 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 RNF135Q8IUD6 432 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TRIML2Q8N7C3 387 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 PRRG3Q9BZD7 231 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 RAB6BQ9NRW1 208 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ADA2Q9NZK5 511 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TRIM49BA6NDI0 452 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ZSCAN9O15535 394 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 NAB2Q15742 525 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 KBTBD12Q3ZCT8 623 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHD8-213ENST00000557364 TMEM86AQ8N2M4 240 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 FEZF2Q8TBJ5 459 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 FAM167BQ9BTA0 163 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 RRAGCQ9HB90 399 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 PSMC3IPQ9P2W1 217 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 TRAF3IP3Q9Y228 551 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 NEURL4Q96JN8 1562 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 HAUS5O94927 633 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ITGB3P05106 788 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 UCHL3P15374 230 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 LIG3P49916 1009 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 PRKAA1Q13131 559 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CASP8Q14790 479 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ZRANB3Q5FWF4 1079 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 C4orf19Q8IY42 314 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ZNF555Q8NEP9 628 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 RPRD1AQ96P16 312 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 ELOVL4Q9GZR5 314 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 PXMP2Q9NR77 195 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 C16orf96A6NNT2 1141 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 C2CD2LO14523 706 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ZMYND10O75800 440 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CYP2A6P11509 494 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 RRM1P23921 792 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CACHD1Q5VU97 1274 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 LZTR1Q8N653 840 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 MAGEC3Q8TD91 643 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 EPC1Q9H2F5 836 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TRPC5OSA6NMA1 111 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 HMBSP08397 361 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 ZNF200P98182 395 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 PPM1LQ5SGD2 360 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 NFRKBQ6P4R8 1299 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TMC2Q8TDI7 906 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 CCDC3Q9BQI4 270 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 NFKBIZQ9BYH8 718 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TRIM4Q9C037 500 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 DDIT4Q9NX09 232 aa8.7□□□□□ -1.02
CHD8-213ENST00000557364 TTC7AQ9ULT0 858 aaPredicted RBP8.7□□□□□ -1.02
CHD8-213ENST00000557364 MLNP12872 115 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 USP10Q14694 798 aaKnown RBP8.69□□□□□ -1.02
CHD8-213ENST00000557364 C16orf89Q6UX73 402 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 ELMO2Q96JJ3 720 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 TMEM237Q96Q45 408 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 XPO7Q9UIA9 1087 aaKnown RBP8.69□□□□□ -1.02
CHD8-213ENST00000557364 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
CHD8-213ENST00000557364 DYRK1BQ9Y463 629 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 DTNAQ9Y4J8 743 aa8.69□□□□□ -1.02
CHD8-213ENST00000557364 MYMKA6NI61 221 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms