RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 B3GALNT2Q8NCR0 500 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 ZSCAN18Q8TBC5 510 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-206ENST00000557358 DEPDC1BQ8WUY9 529 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 NELFBQ8WX92 580 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 FGF14Q92915 247 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 MYLPFQ96A32 169 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 ASIC4Q96FT7 647 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 KXD1Q9BQD3 176 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 MED10Q9BTT4 135 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 CYP3A43Q9HB55 503 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 SLC2A4RGQ9NR83 387 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 TMLHEQ9NVH6 421 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 GNA14O95837 355 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
VPS33B-206ENST00000557358 ATF6P18850 670 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 PTMSP20962 102 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 LMO2P25791 158 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 PDE6CP51160 858 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 CDR1P51861 262 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 NOP14P78316 857 aaKnown RBP14.72□□□□□ -0.05
VPS33B-206ENST00000557358 PAK1Q13153 545 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 DDR2Q16832 855 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 FOXR2Q6PJQ5 311 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 UNC93AQ86WB7 457 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 TMC8Q8IU68 726 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 FBXL13Q8NEE6 735 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 FLCNQ8NFG4 579 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 SHKBP1Q8TBC3 707 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 FAXDC2Q96IV6 333 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 ASB16Q96NS5 453 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 TRMT61BQ9BVS5 477 aaKnown RBP14.72□□□□□ -0.05
VPS33B-206ENST00000557358 GZF1Q9H116 711 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-206ENST00000557358 TASP1Q9H6P5 420 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 SMYD3Q9H7B4 428 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 BRD9Q9H8M2 597 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 KIAA1468Q9P260 1216 aa14.72□□□□□ -0.05
VPS33B-206ENST00000557358 ZDBF2Q9HCK1 2354 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 SOBPA7XYQ1 873 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 NARSO43776 548 aaKnown RBP14.71□□□□□ -0.05
VPS33B-206ENST00000557358 ATP2C2O75185 946 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 VNN1O95497 513 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 GJA1P17302 382 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 PSMC3P17980 439 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 BDNFP23560 247 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 AVPR1AP37288 418 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 CCR2P41597 374 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 CLCN5P51795 746 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 NUBP1P53384 320 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 YWHAEP62258 255 aaKnown RBP14.71□□□□□ -0.05
VPS33B-206ENST00000557358 MORC3Q14149 939 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 NFKBIBQ15653 356 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 CAMK4Q16566 473 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 FAM78AQ5JUQ0 283 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 SCARA3Q6AZY7 606 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 FILIP1Q7Z7B0 1213 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 IRF7Q92985 503 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 EEF2KMTQ96G04 330 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 PCED1BQ96HM7 432 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 SPATA17Q96L03 361 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 PKMYT1Q99640 499 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 NIF3L1Q9GZT8 377 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 CRTAC1Q9NQ79 661 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 ARHGEF3Q9NR81 526 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 THG1LQ9NWX6 298 aaKnown RBP14.71□□□□□ -0.05
VPS33B-206ENST00000557358 DACH1Q9UI36 760 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 CA14Q9ULX7 337 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
VPS33B-206ENST00000557358 ARIH1Q9Y4X5 557 aaPredicted RBP14.71□□□□□ -0.05
VPS33B-206ENST00000557358 MYH10P35580 1976 aa14.71□□□□□ -0.06
VPS33B-206ENST00000557358 ZNF638Q14966 1978 aaKnown RBP14.71□□□□□ -0.06
VPS33B-206ENST00000557358 TRIM49BA6NDI0 452 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 SLC38A8A6NNN8 435 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 ZNF263O14978 683 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 CCDC192P0DO97 292 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 PPP3CCP48454 512 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 CDH8P55286 799 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 GPC5P78333 572 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 PRKCQQ04759 706 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 PPP3CAQ08209 521 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 TPD52L1Q16890 204 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-206ENST00000557358 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-206ENST00000557358 TANGO2Q6ICL3 276 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 DENND5BQ6ZUT9 1274 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 GAREM2Q75VX8 874 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 GPR152Q8TDT2 470 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 TAS1R2Q8TE23 839 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 TRMT2BQ96GJ1 504 aaKnown RBP14.7□□□□□ -0.06
VPS33B-206ENST00000557358 SMARCD1Q96GM5 515 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 LRRC3Q9BY71 257 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 SMOC2Q9H3U7 446 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 FAM124BQ9H5Z6 455 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-206ENST00000557358 TRPV4Q9HBA0 871 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 ZNF334Q9HCZ1 680 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-206ENST00000557358 RAB20Q9NX57 234 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 OBP2AQ9NY56 170 aa14.7□□□□□ -0.06
VPS33B-206ENST00000557358 MRPS17Q9Y2R5 130 aaKnown RBP14.7□□□□□ -0.06
VPS33B-206ENST00000557358 HCRTO43612 131 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms