RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	HOXA6	P31267	233 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TFAM	Q00059	246 aa	Known RBP	12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CEBPZ	Q03701	1054 aa	Known RBP	12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SPEM2	Q0P670	501 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SMARCB1	Q12824	385 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	POSTN	Q15063	836 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DDR2	Q16832	855 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SV2C	Q496J9	727 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ARHGAP15	Q53QZ3	475 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DGKK	Q5KSL6	1271 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	RRAGB	Q5VZM2	374 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TXNDC8	Q6A555	127 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TRIM68	Q6AZZ1	485 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	NUDT18	Q6ZVK8	323 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	METTL23	Q86XA0	190 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	NT5DC4	Q86YG4	428 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GPR161	Q8N6U8	529 aa	Known RBP	12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	FAM200A	Q8TCP9	573 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TATDN2	Q93075	761 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ACCS	Q96QU6	501 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	USP28	Q96RU2	1077 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SLC22A12	Q96S37	553 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PI4K2A	Q9BTU6	479 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MRPL44	Q9H9J2	332 aa	Known RBP	12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PDE11A	Q9HCR9	933 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	AGAP1	Q9UPQ3	857 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MTMR6	Q9Y217	621 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PCDHB5	Q9Y5E4	795 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CACNA1B	Q00975	2339 aa		12.02	□□□□□ -0.49
HNRNPC-231	ENST00000557336	FRY	Q5TBA9	3013 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GABRD	O14764	452 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ARSA	P15289	507 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GAP43	P17677	238 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GART	P22102	1010 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CYP2F1	P24903	491 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LRRC32	Q14392	662 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	VEPH1	Q14D04	833 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SLC39A14	Q15043	492 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ITPRIPL2	Q3MIP1	535 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TMEM196	Q5HYL7	178 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LAIR1	Q6GTX8	287 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	FSTL4	Q6MZW2	842 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	C1orf228	Q6PIY5	440 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SV2B	Q7L1I2	683 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PACS2	Q86VP3	889 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MON1A	Q86VX9	555 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LONP2	Q86WA8	852 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MAB21L3	Q8N8X9	362 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	OR5B17	Q8NGF7	314 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LEO1	Q8WVC0	666 aa	Predicted RBP	12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	EZH1	Q92800	747 aa	Predicted RBP	12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	HPS3	Q969F9	1004 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ACBD6	Q9BR61	282 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PCIF1	Q9H4Z3	704 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GDAP2	Q9NXN4	497 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GTF3C4	Q9UKN8	822 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ZFHX4	Q86UP3	3567 aa		12.01	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DCDC2B	A2VCK2	349 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PRR5-ARHGAP8	B1AHC4	643 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ATP2C2	O75185	946 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PRPF40A	O75400	957 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	NOL4	O94818	638 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PRPF6	O94906	941 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GCNT3	O95395	438 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	RET	P07949	1114 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ARHGAP8	P85298	464 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LMNB2	Q03252	620 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SIM2	Q14190	667 aa	Predicted RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	SOWAHA	Q2M3V2	549 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	INTS6L	Q5JSJ4	861 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LMBRD2	Q68DH5	695 aa	Predicted RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	HEATR6	Q6AI08	1181 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DCP1B	Q8IZD4	617 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CSGALNACT2	Q8N6G5	542 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LRRC52	Q8N7C0	313 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	KBTBD7	Q8WVZ9	684 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MYRFL	Q96LU7	910 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CYP2S1	Q96SQ9	504 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	EBF3	Q9H4W6	596 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TDP1	Q9NUW8	608 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DDX43	Q9NXZ2	648 aa	Known RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	RBAK	Q9NYW8	714 aa	Predicted RBP	12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CCDC39	Q9UFE4	941 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	USP18	Q9UMW8	372 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	NME7	Q9Y5B8	376 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CFAP47	Q6ZTR5	3102 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	USP24	Q9UPU5	2620 aa		12	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CHD6	Q8TD26	2715 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TRDMT1	O14717	391 aa	Known RBP	11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GDF9	O60383	454 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	IDE	P14735	1019 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PDC	P20941	246 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	LMO2	P25791	158 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PNPLA4	P41247	253 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	PXN	P49023	591 aa	Predicted RBP	11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ZXDB	P98169	803 aa		11.99	□□□□□ -0.49
HNRNPC-231	ENST00000557336	RUNX3	Q13761	415 aa		11.99	□□□□□ -0.49

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