RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 ANKMY2Q8IV38 441 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 SRRM1Q8IYB3 904 aaKnown RBP20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 KAT2BQ92831 832 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CABS1Q96KC9 395 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CNOT10Q9H9A5 744 aaKnown RBP20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CAPN7Q9Y6W3 813 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 ANK1P16157 1881 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CYP3A5P20815 502 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 DRD4P21917 467 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 SLC25A11Q02978 314 aaKnown RBP20.3■□□□□ 0.84
FOXN3-214ENST00000557258 LAMC2Q13753 1193 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 MPP2Q14168 576 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 PIGHQ14442 188 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-214ENST00000557258 TMEM132DQ14C87 1099 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 MTHFD1LQ6UB35 978 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 ACTL9Q8TC94 416 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 DYDC1Q8WWB3 177 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 KIF12Q96FN5 646 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 BCO2Q9BYV7 579 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CDHR5Q9HBB8 845 aa20.3■□□□□ 0.84
FOXN3-214ENST00000557258 CCL15-CCL14A0A0B4J2E2 113 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 HGSO14964 777 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-214ENST00000557258 CILPO75339 1184 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 SMPD1P17405 629 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 OTUD4Q01804 1114 aaKnown RBP20.29■□□□□ 0.84
FOXN3-214ENST00000557258 CCL15Q16663 113 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 ZNF792Q3KQV3 632 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 TMEM176AQ96HP8 235 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 POC1B-GALNT4F8VUJ3 575 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 TSPAN1O60635 241 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 ATP11AP98196 1134 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 TMED2Q15363 201 aa20.29■□□□□ 0.84
FOXN3-214ENST00000557258 HIBCHQ6NVY1 386 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-214ENST00000557258 C3orf70A6NLC5 250 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 IL18RAPO95256 599 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 PAEPP09466 180 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 MAGEA4P43358 317 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 ZKSCAN8Q15776 578 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 MARCH8Q5T0T0 291 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 NPNTQ6UXI9 565 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 SYDE1Q6ZW31 735 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 EXOC8Q8IYI6 725 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 ALLCQ8N6M5 410 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 HOMER3Q9NSC5 361 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 MIPP30301 263 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 CDH5P33151 784 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 GRIK4Q16099 956 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 CNGA2Q16280 664 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 ZBED8Q8IZ13 594 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 CCDC33Q8N5R6 958 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 KCTD6Q8NC69 237 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 ELAC2Q9BQ52 826 aaKnown RBP20.28■□□□□ 0.84
FOXN3-214ENST00000557258 ZNF518BQ9C0D4 1074 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 KIF9Q9HAQ2 790 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 DPP3Q9NY33 737 aa20.28■□□□□ 0.84
FOXN3-214ENST00000557258 A0A087WUV0 522 aaPredicted RBP20.27■□□□□ 0.84
FOXN3-214ENST00000557258 SIGLEC16A6NMB1 481 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 E5RJQ4 531 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 NPTXRO95502 500 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 ZNF484Q5JVG2 852 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 ANKRD22Q5VYY1 191 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 TRNP1Q6NT89 227 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 CCDC13Q8IYE1 715 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 PPTC7Q8NI37 304 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.84
FOXN3-214ENST00000557258 ZNF317Q96PQ6 595 aaPredicted RBP20.27■□□□□ 0.84
FOXN3-214ENST00000557258 EIF2AQ9BY44 585 aaKnown RBP20.27■□□□□ 0.84
FOXN3-214ENST00000557258 GPATCH2LQ9NWQ4 482 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 NAALADL1Q9UQQ1 740 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 HTTP42858 3142 aa20.27■□□□□ 0.84
FOXN3-214ENST00000557258 VCPP55072 806 aaKnown RBP20.27■□□□□ 0.83
FOXN3-214ENST00000557258 GKAP1Q5VSY0 366 aaPredicted RBP20.27■□□□□ 0.83
FOXN3-214ENST00000557258 VSTM1Q6UX27 236 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 CACNA2D3Q8IZS8 1091 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 BRI3BPQ8WY22 251 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 PPM1EQ8WY54 764 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 ZMAT2Q96NC0 199 aaKnown RBP20.27■□□□□ 0.83
FOXN3-214ENST00000557258 ACAP3Q96P50 834 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 PEBP4Q96S96 227 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 ADPGKQ9BRR6 497 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 VPS37BQ9H9H4 285 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 TSPAN16Q9UKR8 245 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.27■□□□□ 0.83
FOXN3-214ENST00000557258 PPME1Q9Y570 386 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 SNX9Q9Y5X1 595 aa20.27■□□□□ 0.83
FOXN3-214ENST00000557258 ASAP2O43150 1006 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 MED7O43513 233 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 SPAG7O75391 227 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 OASLQ15646 514 aaKnown RBP20.26■□□□□ 0.83
FOXN3-214ENST00000557258 OR6B2Q6IFH4 312 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 ACOT1Q86TX2 421 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 ZC3H18Q86VM9 953 aaKnown RBP20.26■□□□□ 0.83
FOXN3-214ENST00000557258 RFX6Q8HWS3 928 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 OSMRQ99650 979 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms