RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DNAH12Q6ZR08 3092 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 H3BRB1 525 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 TGFB3P10600 412 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 GAD2Q05329 585 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 PPM1NQ8N819 430 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 STRIP2Q9ULQ0 834 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 KCNN4O15554 427 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 ZBED1O96006 694 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 ADORA2AP29274 412 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 NUMBP49757 651 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 RTP1P59025 263 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 CCNA1P78396 465 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 KAT2BQ92831 832 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 SLITRK1Q96PX8 696 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 TWNKQ96RR1 684 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 SNTG2Q9NY99 539 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 INHBAP08476 426 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 KRT7P08729 469 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 DRG2P55039 364 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 OVGP1Q12889 678 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 EIF1ADQ8N9N8 165 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 MED10Q9BTT4 135 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 CEP41Q9BYV8 373 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 SLC13A1Q9BZW2 595 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 ABCF3Q9NUQ8 709 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 E2F8A0AVK6 867 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 E5RJQ4 531 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 CYP1A1P04798 512 aaPredicted RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 MIPP30301 263 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 BCAR1P56945 870 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 PKN2Q16513 984 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 ERMARDQ5T6L9 678 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 RXFP2Q8WXD0 754 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 RBPJLQ9UBG7 517 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 XPO7Q9UIA9 1087 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 EIF4E1BA6NMX2 242 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 SLC25A27O95847 323 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 C1orf127Q8N9H9 656 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 LENG1Q96BZ8 264 aaPredicted RBP16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 PGM2Q96G03 612 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 B3GNT5Q9BYG0 378 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 DPP3Q9NY33 737 aa16.1■□□□□ 0.17
TMEM55B-207ENST00000557041 A0A0G2JND7 137 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 MICAL2O94851 1124 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 NUDT17P0C025 328 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 KRT4P19013 534 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 SDC4P31431 198 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 ARL4CP56559 192 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 GOLGA7BQ2TAP0 167 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 OR6J1Q8NGC5 347 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 CNTNAP2Q9UHC6 1331 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 TSPAN16Q9UKR8 245 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 CCL15-CCL14A0A0B4J2E2 113 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 A6NJR5 290 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 LGALS2P05162 132 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 RARBP10826 455 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 CCL15Q16663 113 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 PLEKHA7Q6IQ23 1121 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 TMEM176AQ96HP8 235 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 SLC40A1Q9NP59 571 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 PDLIM7Q9NR12 457 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 PRMT7Q9NVM4 692 aaPredicted RBP16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 ASNSD1Q9NWL6 643 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 ZNF112Q9UJU3 913 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 NR2E3Q9Y5X4 410 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 LIASO43766 372 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 ARF4P18085 180 aaPredicted RBP16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 DRD4P21917 467 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 HADHBP55084 474 aaKnown RBP16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 PTK6Q13882 451 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 EFTUD2Q15029 972 aaKnown RBP eCLIP16.09■□□□□ 0.174e-7■■■■■ 39.8
TMEM55B-207ENST00000557041 CNGA2Q16280 664 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 FASTKD5Q7L8L6 764 aaKnown RBP16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 KATNAL2Q8IYT4 538 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 TTC16Q8NEE8 873 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 TMEM134Q9H6X4 195 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 SLCO1B3Q9NPD5 702 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 KLC4Q9NSK0 619 aa16.09■□□□□ 0.17
TMEM55B-207ENST00000557041 CCDC78A2IDD5 438 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 CCT8L1PA6NM43 557 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 CREB3O43889 395 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 AVILO75366 819 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 MT-ND3P03897 115 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 PHBP35232 272 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 SCTRP47872 440 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 AP3M2P53677 418 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 CAV1Q03135 178 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 NME3Q13232 169 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 SIX1Q15475 284 aaPredicted RBP16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 TRPM8Q7Z2W7 1104 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms