RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 ATP2A3Q93084 1043 aa18.4■□□□□ 0.54
CHGA-206ENST00000556876 SAAL1Q96ER3 474 aa18.4■□□□□ 0.54
CHGA-206ENST00000556876 CLIC6Q96NY7 704 aa18.4■□□□□ 0.54
CHGA-206ENST00000556876 SEMA4GQ9NTN9 838 aa18.4■□□□□ 0.54
CHGA-206ENST00000556876 L1RE1Q9UN81 338 aa18.4■□□□□ 0.54
CHGA-206ENST00000556876 MAGED2Q9UNF1 606 aaPredicted RBP18.4■□□□□ 0.54
CHGA-206ENST00000556876 TXNDC8Q6A555 127 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 CACNA2D4Q7Z3S7 1137 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 TMEM150AQ86TG1 271 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 TTC8Q8TAM2 541 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 INTS13Q9NVM9 706 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 GTF3C4Q9UKN8 822 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 CDH9Q9ULB4 789 aa18.39■□□□□ 0.53
CHGA-206ENST00000556876 SLC30A4O14863 429 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 TCF3P15923 654 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 CEBPZQ03701 1054 aaKnown RBP18.38■□□□□ 0.53
CHGA-206ENST00000556876 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 Q6ZS52 159 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 IQUBQ8NA54 791 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 GAB3Q8WWW8 586 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 HPDLQ96IR7 371 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 SPATA17Q96L03 361 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 ZNF396Q96N95 335 aaPredicted RBP18.38■□□□□ 0.53
CHGA-206ENST00000556876 CBWD1Q9BRT8 395 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 PDE11AQ9HCR9 933 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 TMLHEQ9NVH6 421 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 MAGEC2Q9UBF1 373 aaPredicted RBP18.38■□□□□ 0.53
CHGA-206ENST00000556876 COL4A3Q01955 1670 aa18.38■□□□□ 0.53
CHGA-206ENST00000556876 EIF3DO15371 548 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHGA-206ENST00000556876 PPP6R2O75170 966 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 CKMP06732 381 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 CYP2F1P24903 491 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 NASPP49321 788 aaPredicted RBP18.37■□□□□ 0.53
CHGA-206ENST00000556876 MTF1Q14872 753 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 STK38Q15208 465 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 LPAL2Q16609 132 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 DDR2Q16832 855 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 HEATR6Q6AI08 1181 aaKnown RBP18.37■□□□□ 0.53
CHGA-206ENST00000556876 PRR23CQ6ZRP0 262 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 WDR49Q8IV35 697 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 CXorf38Q8TB03 319 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 OSCP1Q8WVF1 389 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 ACDQ96AP0 544 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 PKMYT1Q99640 499 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 P2RY13Q9BPV8 354 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 MTMR12Q9C0I1 747 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 SMG9Q9H0W8 520 aaKnown RBP18.37■□□□□ 0.53
CHGA-206ENST00000556876 EBF3Q9H4W6 596 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 PARD6AQ9NPB6 346 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 HPS4Q9NQG7 708 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 DUS2Q9NX74 493 aaKnown RBP18.37■□□□□ 0.53
CHGA-206ENST00000556876 CGNQ9P2M7 1197 aaKnown RBP18.37■□□□□ 0.53
CHGA-206ENST00000556876 PCDHGA5Q9Y5G8 931 aa18.37■□□□□ 0.53
CHGA-206ENST00000556876 RPP40O75818 363 aaKnown RBP18.36■□□□□ 0.53
CHGA-206ENST00000556876 PRPF6O94906 941 aaKnown RBP18.36■□□□□ 0.53
CHGA-206ENST00000556876 ANXA13P27216 316 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 IFNAR2P48551 515 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 CASP5P51878 434 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 KCNB1Q14721 858 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 SOWAHAQ2M3V2 549 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 CNNM4Q6P4Q7 775 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 LIMS2Q7Z4I7 341 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 C11orf74Q86VG3 221 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 SCN4BQ8IWT1 228 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 NOC3LQ8WTT2 800 aaKnown RBP18.36■□□□□ 0.53
CHGA-206ENST00000556876 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 FNBP1Q96RU3 617 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 PANK2Q9BZ23 570 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 PCIF1Q9H4Z3 704 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 KBTBD4Q9NVX7 518 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 CCL26Q9Y258 94 aa18.36■□□□□ 0.53
CHGA-206ENST00000556876 GOLGA8IPA6NC78 632 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 GOLGA8JA6NMD2 632 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 TRIM66O15016 1216 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 STX6O43752 255 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 HDCP19113 662 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 LIMK1P53667 647 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 HS2ST1Q7LGA3 356 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 FAM160A2Q8N612 972 aaPredicted RBP18.35■□□□□ 0.53
CHGA-206ENST00000556876 C12orf50Q8NA57 414 aaPredicted RBP18.35■□□□□ 0.53
CHGA-206ENST00000556876 LINC00301Q8NCQ3 95 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 IKZF4Q9H2S9 585 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 TRPC7Q9HCX4 862 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 HSPBP1Q9NZL4 362 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 TRPM5Q9NZQ8 1165 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 SIX4Q9UIU6 781 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 ARHGAP26Q9UNA1 814 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 NCOR2Q9Y618 2525 aa18.35■□□□□ 0.53
CHGA-206ENST00000556876 UBE4BO95155 1302 aa18.34■□□□□ 0.53
CHGA-206ENST00000556876 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.34■□□□□ 0.53
CHGA-206ENST00000556876 SLC9A3R1O14745 358 aaPredicted RBP18.34■□□□□ 0.53
CHGA-206ENST00000556876 SPTLC2O15270 562 aa18.34■□□□□ 0.53
CHGA-206ENST00000556876 NFATC1O95644 943 aa18.34■□□□□ 0.53
CHGA-206ENST00000556876 CCDC192P0DO97 292 aa18.34■□□□□ 0.53
CHGA-206ENST00000556876 WARSP23381 471 aaKnown RBP18.34■□□□□ 0.53
CHGA-206ENST00000556876 ACAT1P24752 427 aaKnown RBP18.34■□□□□ 0.53
CHGA-206ENST00000556876 GJA4P35212 333 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms