RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 MAGEC2Q9UBF1 373 aaPredicted RBP24.39■■□□□ 1.49
TDP1-216ENST00000556867 RWDD2AQ9UIY3 292 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 DUSP12Q9UNI6 340 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 NUMBLQ9Y6R0 609 aa24.39■■□□□ 1.49
TDP1-216ENST00000556867 CCDC40Q4G0X9 1142 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 CBWD6Q4V339 395 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 CBWD3Q5JTY5 395 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 CBWD5Q5RIA9 395 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 PARM1Q6UWI2 310 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 VSTM1Q6UX27 236 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 SLC44A3Q8N4M1 653 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 GPT2Q8TD30 523 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 FGF14Q92915 247 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 FAXDC2Q96IV6 333 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 CYP3A43Q9HB55 503 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 RAB20Q9NX57 234 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 COQ4Q9Y3A0 265 aa24.38■■□□□ 1.49
TDP1-216ENST00000556867 PRR33A8MZF0 331 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 LRRN2O75325 713 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 GNA14O95837 355 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 GJA1P17302 382 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 CYP27A1Q02318 531 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 DDR2Q16832 855 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 GAREM2Q75VX8 874 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 UNC93AQ86WB7 457 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 GPR152Q8TDT2 470 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 ASIC4Q96FT7 647 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 TNIP3Q96KP6 325 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 IL21Q9HBE4 155 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.37■■□□□ 1.492e-9■■■■■ 223.6
TDP1-216ENST00000556867 GREB1Q4ZG55 1949 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 DENND4CQ5VZ89 1909 aa24.37■■□□□ 1.49
TDP1-216ENST00000556867 A0A1W2PRU2 124 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 TMEM221A6NGB7 291 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 M0R296 226 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 CSH1P0DML2 217 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 CSH2P0DML3 217 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 HMGA1P17096 107 aaKnown RBP24.36■■□□□ 1.49
TDP1-216ENST00000556867 BDNFP23560 247 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 GABRR2P28476 465 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 MARSP56192 900 aaKnown RBP24.36■■□□□ 1.49
TDP1-216ENST00000556867 INCA1Q0VD86 236 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 TEAD2Q15562 447 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 TAF12Q16514 161 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 CEP295NLQ96MC4 621 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 LRFN3Q9BTN0 628 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 GPR88Q9GZN0 384 aa24.36■■□□□ 1.49
TDP1-216ENST00000556867 OBSL1O75147 1896 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 PMM2O15305 246 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 NOL4O94818 638 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 FGFR1OPO95684 399 aaKnown RBP24.35■■□□□ 1.49
TDP1-216ENST00000556867 CDC25CP30307 473 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 NDST1P52848 882 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 SDHAF4Q5VUM1 108 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 SCN4BQ8IWT1 228 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 ST13P5Q8NFI4 369 aaPredicted RBP24.35■■□□□ 1.49
TDP1-216ENST00000556867 SPATA17Q96L03 361 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 ASB16Q96NS5 453 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 MED15Q96RN5 788 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 SRRTQ9BXP5 876 aaKnown RBP24.35■■□□□ 1.49
TDP1-216ENST00000556867 ELOVL4Q9GZR5 314 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 HMGXB4Q9UGU5 601 aa24.35■■□□□ 1.49
TDP1-216ENST00000556867 NARSO43776 548 aaKnown RBP24.34■■□□□ 1.49
TDP1-216ENST00000556867 ECI2O75521 394 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 SRFP11831 508 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 FCARP24071 287 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 FMO5P49326 533 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 WDR44Q5JSH3 913 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 FAM78AQ5JUQ0 283 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 BMP8AQ7Z5Y6 402 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 TRIM59Q8IWR1 403 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 CRYBG2Q8N1P7 616 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 STKLD1Q8NE28 680 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 TRMT2BQ96GJ1 504 aaKnown RBP24.34■■□□□ 1.49
TDP1-216ENST00000556867 MYRFLQ96LU7 910 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 ZSWIM3Q96MP5 696 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 GCNAQ96QF7 691 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 RPP25Q9BUL9 199 aaKnown RBP24.34■■□□□ 1.49
TDP1-216ENST00000556867 B3GNT5Q9BYG0 378 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 ATXN3LQ9H3M9 355 aa24.34■■□□□ 1.49
TDP1-216ENST00000556867 NUP210Q8TEM1 1887 aaPredicted RBP24.33■■□□□ 1.49
TDP1-216ENST00000556867 SLC38A8A6NNN8 435 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 TRIM66O15016 1216 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 DPCR1Q3MIW9 517 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 ARHGAP15Q53QZ3 475 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 ACOT1Q86TX2 421 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 SMARCD2Q92925 531 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 KXD1Q9BQD3 176 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 ZNF518BQ9C0D4 1074 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 SLITRK6Q9H5Y7 841 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 TRPV4Q9HBA0 871 aa24.33■■□□□ 1.49
TDP1-216ENST00000556867 UXTQ9UBK9 157 aaPredicted RBP24.33■■□□□ 1.49
TDP1-216ENST00000556867 ATP8B3O60423 1300 aa24.33■■□□□ 1.48
TDP1-216ENST00000556867 CILPO75339 1184 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 MBD3O95983 291 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 CCDC192P0DO97 292 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 GRIK1P39086 918 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 NLRP12P59046 1061 aa24.32■■□□□ 1.48
TDP1-216ENST00000556867 RBM43Q6ZSC3 357 aaKnown RBP24.32■■□□□ 1.48
TDP1-216ENST00000556867 HFE2Q6ZVN8 426 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms