RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
TUBB3-211ENST00000556536 SPC24Q8NBT2 197 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 PCED1BQ96HM7 432 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 RHOBTB2Q9BYZ6 727 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 CRISPLD1Q9H336 500 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 MTCH2Q9Y6C9 303 aa18.5■□□□□ 0.55
TUBB3-211ENST00000556536 MTMR11A4FU01 709 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 TGM5O43548 720 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 MFAP3LO75121 409 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 SPATA31D3P0C874 917 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 VDRP11473 427 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 GNA15P30679 374 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-211ENST00000556536 KRT9P35527 623 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 NRIP1P48552 1158 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 CYP27A1Q02318 531 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 DUSP6Q16828 381 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 PPP1R26Q5T8A7 1209 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-211ENST00000556536 SFMBT2Q5VUG0 894 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 LILRA6Q6PI73 481 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 SPATA31D4Q6ZUB0 917 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 IRF2BP2Q7Z5L9 587 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 FUKQ8N0W3 1084 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 TTC9BQ8N6N2 239 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 ATAD1Q8NBU5 361 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 ZNF397Q8NF99 534 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-211ENST00000556536 ZNF461Q8TAF7 563 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 SLC2A14Q8TDB8 520 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 CYFIP2Q96F07 1278 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 ZNF518BQ9C0D4 1074 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 DNAI2Q9GZS0 605 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 TLE6Q9H808 572 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 ABI2Q9NYB9 513 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-211ENST00000556536 LMCD1Q9NZU5 365 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 KIAA1257Q9ULG3 409 aa18.49■□□□□ 0.55
TUBB3-211ENST00000556536 AKR1B15C9JRZ8 316 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 O00370 1275 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 SEC24AO95486 1093 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 CFHP08603 1231 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 TPM1P09493 284 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 CYP11B1P15538 503 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 ADORA2BP29275 332 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 GTF2F1P35269 517 aaKnown RBP eCLIP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 CLCN4P51793 760 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 PTK2Q05397 1052 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 ADCY1Q08828 1119 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 MAPRE1Q15691 268 aaKnown RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 ASIC2Q16515 512 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 NFE2Q16621 373 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 AAK1Q2M2I8 961 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 SGO2Q562F6 1265 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 TCEAL5Q5H9L2 206 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 TPGS2Q68CL5 300 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 ARHGAP17Q68EM7 881 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 NOP9Q86U38 636 aaKnown RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 SPATA2LQ8IUW3 424 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 SLC22A17Q8WUG5 538 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 HNRNPABQ99729 332 aaKnown RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 MED10Q9BTT4 135 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 NSUN3Q9H649 340 aaKnown RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 AIPL1Q9NZN9 384 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 AFF4Q9UHB7 1163 aaKnown RBP18.48■□□□□ 0.55
TUBB3-211ENST00000556536 SLC27A5Q9Y2P5 690 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 PCDHB5Q9Y5E4 795 aa18.48■□□□□ 0.55
TUBB3-211ENST00000556536 THAP12O43422 761 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 ATF2P15336 505 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 EPCAMP16422 314 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 FERP16591 822 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 POU3F3P20264 500 aaPredicted RBP18.47■□□□□ 0.55
TUBB3-211ENST00000556536 BDNFP23560 247 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 CYP2F1P24903 491 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 CACNA2D1P54289 1103 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 BPIFB4P59827 614 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 RBM10P98175 930 aaKnown RBP18.47■□□□□ 0.55
TUBB3-211ENST00000556536 HYAL1Q12794 435 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 DUSP4Q13115 394 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 ARID5BQ14865 1188 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 GOLGA7BQ2TAP0 167 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 C4orf50Q6ZRC1 276 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 FAM35AQ86V20 835 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 TC2NQ8N9U0 490 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 EPS8L1Q8TE68 723 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 SLC20A1Q8WUM9 679 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 ZNF606Q8WXB4 792 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 DDX1Q92499 740 aaKnown RBP18.47■□□□□ 0.55
TUBB3-211ENST00000556536 DNAJC7Q99615 494 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 TMEM30AQ9NV96 361 aa18.47■□□□□ 0.55
TUBB3-211ENST00000556536 NOCTQ9UK39 431 aaKnown RBP18.47■□□□□ 0.55
TUBB3-211ENST00000556536 SOAT2O75908 522 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 MICAL2O94851 1124 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 GLUD1P00367 558 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 SKILP12757 684 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 BMP1P13497 986 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 CHRNB2P17787 502 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 SMARCB1Q12824 385 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 CNGA2Q16280 664 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 CFAP221Q4G0U5 840 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 TAF3Q5VWG9 929 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 LLGL2Q6P1M3 1020 aa18.46■□□□□ 0.55
TUBB3-211ENST00000556536 DENND1BQ6P3S1 775 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms