RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 MAGED2Q9UNF1 606 aaPredicted RBP18.21■□□□□ 0.51
PSEN1-217ENST00000556533 CLDN5O00501 218 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 AFPP02771 609 aaKnown RBP18.2■□□□□ 0.5
PSEN1-217ENST00000556533 ALADP13716 330 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 MTMR3Q13615 1198 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 PRSS36Q5K4E3 855 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 NPAS3Q8IXF0 933 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 LEMD2Q8NC56 503 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 FUBP3Q96I24 572 aaKnown RBP eCLIP18.2■□□□□ 0.5
PSEN1-217ENST00000556533 AVENQ9NQS1 362 aaPredicted RBP18.2■□□□□ 0.5
PSEN1-217ENST00000556533 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 COQ4Q9Y3A0 265 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 TSC2P49815 1807 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
PSEN1-217ENST00000556533 A0A1W2PRU2 124 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 NRG2O14511 850 aaPredicted RBP18.19■□□□□ 0.5
PSEN1-217ENST00000556533 MARSP56192 900 aaKnown RBP18.19■□□□□ 0.5
PSEN1-217ENST00000556533 TEAD2Q15562 447 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 ZNF394Q53GI3 561 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 UNC93AQ86WB7 457 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 IRF2BP1Q8IU81 584 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 TWNKQ96RR1 684 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 ARID3AQ99856 593 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 LRRC3Q9BY71 257 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 ZNF518BQ9C0D4 1074 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 ATXN3LQ9H3M9 355 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 THAP9Q9H5L6 903 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 SLITRK6Q9H5Y7 841 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 KCNK12Q9HB15 430 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 ZFP37Q9Y6Q3 630 aaPredicted RBP18.19■□□□□ 0.5
PSEN1-217ENST00000556533 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
PSEN1-217ENST00000556533 BDP1A6H8Y1 2624 aa18.19■□□□□ 0.5
PSEN1-217ENST00000556533 SLC38A8A6NNN8 435 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 TRIM21P19474 475 aaKnown RBP18.18■□□□□ 0.5
PSEN1-217ENST00000556533 ANXA13P27216 316 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 GABRR2P28476 465 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 MAGEA11P43364 429 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 EPHA5P54756 1037 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 STX1AQ16623 288 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 CT47A1Q5JQC4 288 aaPredicted RBP18.18■□□□□ 0.5
PSEN1-217ENST00000556533 VSTM1Q6UX27 236 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 TMC8Q8IU68 726 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 FAM114A1Q8IWE2 563 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 CRYBG2Q8N1P7 616 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 C12orf29Q8N999 325 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 SHKBP1Q8TBC3 707 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 ZSWIM3Q96MP5 696 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 NT5C1AQ9BXI3 368 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 DNAI2Q9GZS0 605 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 CISHQ9NSE2 258 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 FAM49BQ9NUQ9 324 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 ANO10Q9NW15 660 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 GDE1Q9NZC3 331 aa18.18■□□□□ 0.5
PSEN1-217ENST00000556533 MOSPD3O75425 235 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 FGF19O95750 216 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 CSH1P0DML2 217 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 CSH2P0DML3 217 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 CCDC130P13994 396 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 CUL2Q13617 745 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 PARM1Q6UWI2 310 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 GPIHBP1Q8IV16 184 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 SLC2A14Q8TDB8 520 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 HEXIM2Q96MH2 286 aaKnown RBP18.17■□□□□ 0.5
PSEN1-217ENST00000556533 NT5C1BQ96P26 610 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 GCNAQ96QF7 691 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 KXD1Q9BQD3 176 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 ELOVL4Q9GZR5 314 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 SMOC2Q9H3U7 446 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 SAMSN1Q9NSI8 373 aaKnown RBP18.17■□□□□ 0.5
PSEN1-217ENST00000556533 IGSF9Q9P2J2 1179 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 SORCS3Q9UPU3 1222 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 NUMBLQ9Y6R0 609 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 ATP8B3O60423 1300 aa18.17■□□□□ 0.5
PSEN1-217ENST00000556533 F8VP50 259 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 TRIM66O15016 1216 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 PMM2O15305 246 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 P4HA2O15460 535 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 CILPO75339 1184 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 MICAL2O94851 1124 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 HMGA1P17096 107 aaKnown RBP18.16■□□□□ 0.5
PSEN1-217ENST00000556533 ADORA2BP29275 332 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 CACNA2D1P54289 1103 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 ZXDAP98168 799 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 TDGQ13569 410 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 HTR4Q13639 388 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 ARHGAP15Q53QZ3 475 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 POTEHQ6S545 545 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 C11orf57Q6ZUT1 292 aaPredicted RBP18.16■□□□□ 0.5
PSEN1-217ENST00000556533 GAREM2Q75VX8 874 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 PPM1KQ8N3J5 372 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 WHAMMQ8TF30 809 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 CRACR2AQ9BSW2 395 aa18.16■□□□□ 0.5
PSEN1-217ENST00000556533 RPP25Q9BUL9 199 aaKnown RBP18.16■□□□□ 0.5
PSEN1-217ENST00000556533 INTS2Q9H0H0 1204 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms