RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 AGPAT3Q9NRZ7 376 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 SOBPA7XYQ1 873 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 CLIC2O15247 247 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 NOL4O94818 638 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 F13A1P00488 732 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 SATB1Q01826 763 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 CCDC142Q17RM4 750 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 WDR44Q5JSH3 913 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 UNC13DQ70J99 1090 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 WDR49Q8IV35 697 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 SCN4BQ8IWT1 228 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 NELFCDQ8IXH7 590 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 BLZF1Q9H2G9 400 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 MAGEF1Q9HAY2 307 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 TDP1Q9NUW8 608 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 FAM13BQ9NYF5 915 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 UXTQ9UBK9 157 aaPredicted RBP24.22■■□□□ 1.47
ACTN1-220ENST00000556433 PCDHA7Q9UN72 937 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 SMG5Q9UPR3 1016 aaKnown RBP24.22■■□□□ 1.47
ACTN1-220ENST00000556433 CCL26Q9Y258 94 aa24.22■■□□□ 1.47
ACTN1-220ENST00000556433 ZNF292O60281 2723 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 ATP2C2O75185 946 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 LMO2P25791 158 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 CASP1P29466 404 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 ME1P48163 572 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 CYP2J2P51589 502 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 SNRNP35Q16560 246 aaKnown RBP24.21■■□□□ 1.47
ACTN1-220ENST00000556433 CFAP221Q4G0U5 840 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 FAM171BQ6P995 826 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 TRAPPC11Q7Z392 1133 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 LIMS2Q7Z4I7 341 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 SCFD1Q8WVM8 642 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 SECISBP2LQ93073 1101 aaKnown RBP24.21■■□□□ 1.47
ACTN1-220ENST00000556433 RMDN1Q96DB5 314 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 FUBP3Q96I24 572 aaKnown RBP eCLIP24.21■■□□□ 1.47
ACTN1-220ENST00000556433 FAM83CQ9BQN1 747 aa24.21■■□□□ 1.47
ACTN1-220ENST00000556433 NUP210Q8TEM1 1887 aaPredicted RBP24.21■■□□□ 1.47
ACTN1-220ENST00000556433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.2■■□□□ 1.46
ACTN1-220ENST00000556433 DLATP10515 647 aaKnown RBP24.2■■□□□ 1.46
ACTN1-220ENST00000556433 TNNI1P19237 187 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 SNRPFP62306 86 aaKnown RBP24.2■■□□□ 1.46
ACTN1-220ENST00000556433 C4orf50Q6ZRC1 276 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 Q6ZS52 159 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 ERMP1Q7Z2K6 904 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 KBTBD7Q8WVZ9 684 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 CCDC127Q96BQ5 260 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 TRMT2BQ96GJ1 504 aaKnown RBP24.2■■□□□ 1.46
ACTN1-220ENST00000556433 MYRFLQ96LU7 910 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 FNBP1Q96RU3 617 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 MMS19Q96T76 1030 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 SYT15Q9BQS2 421 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 KIF9Q9HAQ2 790 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 MAGEC2Q9UBF1 373 aaPredicted RBP24.2■■□□□ 1.46
ACTN1-220ENST00000556433 CDH9Q9ULB4 789 aa24.2■■□□□ 1.46
ACTN1-220ENST00000556433 UBE4BO95155 1302 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 CST3P01034 146 aaPredicted RBP24.19■■□□□ 1.46
ACTN1-220ENST00000556433 PDGFRBP09619 1106 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 AFMP43652 599 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 PSMC1P62191 440 aaKnown RBP24.19■■□□□ 1.46
ACTN1-220ENST00000556433 EHHADHQ08426 723 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 RUNX3Q13761 415 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 CC2D1AQ6P1N0 951 aaPredicted RBP24.19■■□□□ 1.46
ACTN1-220ENST00000556433 HS2ST1Q7LGA3 356 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 XXYLT1Q8NBI6 393 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 EBF3Q9H4W6 596 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 TRPC7Q9HCX4 862 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 SLC39A2Q9NP94 309 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 HPS4Q9NQG7 708 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 CFAP45Q9UL16 551 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 WDR87Q6ZQQ6 2873 aa24.19■■□□□ 1.46
ACTN1-220ENST00000556433 PVALEFA0A1B0GWK0 134 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 WARSP23381 471 aaKnown RBP24.18■■□□□ 1.46
ACTN1-220ENST00000556433 MAGEA11P43364 429 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 CYP24A1Q07973 514 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 CCINQ13939 588 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 PSMD6Q15008 389 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 RESP18Q5W5W9 173 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 TRIM68Q6AZZ1 485 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 ATL3Q6DD88 541 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 SYNPOQ8N3V7 929 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 SPRYD3Q8NCJ5 442 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 CGRRF1Q99675 332 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 CRTAC1Q9NQ79 661 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 RAB23Q9ULC3 237 aa24.18■■□□□ 1.46
ACTN1-220ENST00000556433 CHURC1-FNTBB4DL54 471 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 TADA3O75528 432 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 FNTBP49356 437 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 CUL4BQ13620 913 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 ZNF268Q14587 947 aaPredicted RBP24.17■■□□□ 1.46
ACTN1-220ENST00000556433 MAPRE1Q15691 268 aaKnown RBP24.17■■□□□ 1.46
ACTN1-220ENST00000556433 GPR161Q8N6U8 529 aaKnown RBP24.17■■□□□ 1.46
ACTN1-220ENST00000556433 MYLPFQ96A32 169 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 CYP2S1Q96SQ9 504 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 SNX25Q9H3E2 840 aa24.17■■□□□ 1.46
ACTN1-220ENST00000556433 PAPSS2O95340 614 aaPredicted RBP24.16■■□□□ 1.46
ACTN1-220ENST00000556433 BDNFP23560 247 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 GNL1P36915 607 aaPredicted RBP24.16■■□□□ 1.46
ACTN1-220ENST00000556433 GRIK1P39086 918 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 CYP27A1Q02318 531 aa24.16■■□□□ 1.46
ACTN1-220ENST00000556433 DNM1Q05193 864 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms