RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MCPH1Q8NEM0 835 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ACTRT1Q8TDG2 376 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ASAP3Q8TDY4 903 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 SCFD2Q8WU76 684 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF516Q92618 1163 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 RUBCNQ92622 972 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 E2F7Q96AV8 911 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 AGPAT1Q99943 283 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 SPATC1LQ9H0A9 340 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 POLR3FQ9H1D9 316 aaPredicted RBP5.36□□□□□ -1.55
TMEM260-210ENST00000556422 PLEKHA5Q9HAU0 1116 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ATP6V0A4Q9HBG4 840 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 TCF7L2Q9NQB0 619 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 GDF3Q9NR23 364 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ADARB2Q9NS39 739 aaKnown RBP5.36□□□□□ -1.55
TMEM260-210ENST00000556422 EXOC7Q9UPT5 735 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF510Q9Y2H8 683 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 HTTP42858 3142 aa5.36□□□□□ -1.55
TMEM260-210ENST00000556422 ESYT3A0FGR9 886 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 DDX3YO15523 660 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ABCB7O75027 752 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CLASP2O75122 1294 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 DNAJC8O75937 253 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ARIH2O95376 493 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SGPL1O95470 568 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 GLRA2P23416 452 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ECHS1P30084 290 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PAFAH1B1P43034 410 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 OXCT1P55809 520 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 DRP2Q13474 957 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SEMA3AQ14563 771 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 RPS6KA1Q15418 735 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 TARBP2Q15633 366 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 STK11Q15831 433 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 IGSF11Q5DX21 431 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 XKR3Q5GH77 459 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CDCA2Q69YH5 1023 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 KRT39Q6A163 491 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 C8orf74Q6P047 294 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CRELD2Q6UXH1 353 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SV2AQ7L0J3 742 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 NLRP14Q86W24 1093 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 RASSF3Q86WH2 238 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ANKRD35Q8N283 1001 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 GOLM1Q8NBJ4 401 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 STON2Q8WXE9 905 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 RIN2Q8WYP3 895 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 DDX1Q92499 740 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ABTB1Q969K4 478 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SLC35B4Q969S0 331 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM143Q96AN5 459 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 TRPV6Q9H1D0 765 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PORCNQ9H237 461 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PLEKHA4Q9H4M7 779 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM8AQ9HCN3 771 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SUCLA2Q9P2R7 463 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 STYXL1Q9Y6J8 313 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 TTLL13PA6NNM8 815 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 RAD51CO43502 376 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ATP9BO43861 1147 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 MTHFD1P11586 935 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CD9P21926 228 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 DNAJB2P25686 324 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PTGS2P35354 604 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 HADHBP55084 474 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CD83Q01151 205 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 FMO1Q01740 532 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PCSK7Q16549 785 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 MAJINQ3KP22 176 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 FAM133BQ5BKY9 247 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 SCARA3Q6AZY7 606 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 MIS18BP1Q6P0N0 1132 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 C1orf228Q6PIY5 440 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 OSTM1Q86WC4 334 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PPM1KQ8N3J5 372 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 POMGNT1Q8WZA1 660 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PBXIP1Q96AQ6 731 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PGBD4Q96DM1 585 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 OTUD5Q96G74 571 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 NLRP4Q96MN2 994 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF302Q9NR11 478 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ATAD3AQ9NVI7 634 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CHORDC1Q9UHD1 332 aaPredicted RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 MOSPD1Q9UJG1 213 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF180Q9UJW8 692 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 NOC2LQ9Y3T9 749 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 NR2E1Q9Y466 385 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ADGRA2Q96PE1 1338 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PCP4L1A6NKN8 68 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CYP26A1O43174 497 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 KPNA6O60684 536 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ITGA4P13612 1032 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 YBX3P16989 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 GARTP22102 1010 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 PSMA3P25788 255 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ARL2P36404 184 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 ADCY8P40145 1251 aa5.35□□□□□ -1.55
TMEM260-210ENST00000556422 CARSP49589 748 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 NLRP11P59045 1033 aaKnown RBP5.35□□□□□ -1.55
TMEM260-210ENST00000556422 GLE1Q53GS7 698 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms