RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 SOX5P35711 763 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ZNF132P52740 706 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 PTK2Q05397 1052 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SMARCB1Q12824 385 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 LILRA6Q6PI73 481 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ELMSAN1Q6PJG2 1045 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SCN4BQ8IWT1 228 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 DRC7Q8IY82 874 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 FAM71AQ8IYT1 594 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 EFHBQ8N7U6 833 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SPPL2BQ8TCT7 592 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 CRISPLD1Q9H336 500 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 FBXW11Q9UKB1 542 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 LRRC53A6NM62 1247 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 THAP12O43422 761 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 VNN2O95498 520 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 TPM1P09493 284 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 VDRP11473 427 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 JAM2P57087 298 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 PPP1R26Q5T8A7 1209 aaPredicted RBP14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 CCDC149Q6ZUS6 474 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 FAM35AQ86V20 835 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 SLC47A2Q86VL8 602 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 FUKQ8N0W3 1084 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 ZNF397Q8NF99 534 aaPredicted RBP14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 C2orf15Q8WU43 125 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 TFAP2BQ92481 460 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 CASP10Q92851 521 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 MRFAP1L1Q96HT8 127 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 APOL5Q9BWW9 433 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 KRT82Q9NSB4 513 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 DPP7Q9UHL4 492 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
VIPAS39-208ENST00000556412 FSD2A1L4K1 749 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 GYPCP04921 128 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 CASP14P31944 242 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 CLCN1P35523 988 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 GRIK1P39086 918 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 FIGNQ5HY92 759 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 PPM1LQ5SGD2 360 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 BAP1Q92560 729 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 TTYH3Q9C0H2 523 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 PLEKHA4Q9H4M7 779 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 HESX1Q9UBX0 185 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 KIAA1257Q9ULG3 409 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 LUC7L2Q9Y383 392 aaKnown RBP14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 YIPF1Q9Y548 306 aa14.9□□□□□ -0.02
VIPAS39-208ENST00000556412 RFPL2O75678 378 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 AP1G2O75843 785 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 GLP2RO95838 553 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 LRG1P02750 347 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 FAM200BP0CF97 657 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 HAPLN1P10915 354 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 ALDH1A3P47895 512 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 GPR15P49685 360 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 PDE6CP51160 858 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 BPIFB4P59827 614 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TWF1Q12792 350 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TRIM14Q14142 442 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 GSE1Q14687 1217 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 DDR2Q16832 855 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 CFAP221Q4G0U5 840 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 SDHAF4Q5VUM1 108 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TAF3Q5VWG9 929 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TCEAL8Q8IYN2 117 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 GPR152Q8TDT2 470 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 IQCDQ96DY2 449 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 SMARCD1Q96GM5 515 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 HNRNPABQ99729 332 aaKnown RBP14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 PDCL3Q9H2J4 239 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 ABCB6Q9NP58 842 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TSPAN16Q9UKR8 245 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 INSL5Q9Y5Q6 135 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TSC2P49815 1807 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 A0A1W2PQJ5 194 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 M0QYV0 167 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 O00370 1275 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 MED7O43513 233 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 CYP11B1P15538 503 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 TUFMP49411 452 aaKnown RBP14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 CACNA2D1P54289 1103 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 ADAM15Q13444 863 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 ASIC2Q16515 512 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 SFMBT2Q5VUG0 894 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 PAQR9Q6ZVX9 377 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 UBA3Q8TBC4 463 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 GIPC2Q8TF65 315 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 ZSWIM1Q9BR11 485 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 EDEM3Q9BZQ6 932 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 MAFFQ9ULX9 164 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 CAPN11Q9UMQ6 739 aa14.89□□□□□ -0.03
VIPAS39-208ENST00000556412 VWA8A3KMH1 1905 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 FAM170AA1A519 330 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 F8VP50 259 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 CCL16O15467 120 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 NCK2O43639 380 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms