RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 NAV1Q8NEY1 1877 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 SZT2Q5T011 3432 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 COL11A1P12107 1806 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 TSPY2A6NKD2 308 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 TMEM232C9JQI7 657 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ZNF561-AS1K7EIQ3 104 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 SMIM22K7EJ46 135 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 M0R2C6 588 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ARVCFO00192 962 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ZEB2O60315 1214 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 RANBP6O60518 1105 aaKnown RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 HIP1RO75146 1068 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 REC8O95072 547 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 NDUFB10O96000 172 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 CLTBP09497 229 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 C6orf222P0C671 652 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ALAS1P13196 640 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 MCCP23508 829 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 SLC1A4P43007 532 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 TERF1P54274 439 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 SNAP25P60880 206 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 GABREP78334 506 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 RIN1Q13671 783 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ACVR2BQ13705 512 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 CCDC96Q2M329 555 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 RRP12Q5JTH9 1297 aaKnown RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 FAM209AQ5JX71 171 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 TRIM68Q6AZZ1 485 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 CCDC174Q6PII3 467 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 CCDC129Q6ZRS4 1044 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ZNF662Q6ZS27 426 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 FAM160B2Q86V87 743 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ZNF575Q86XF7 245 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 LDLRAD3Q86YD5 345 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 TMPRSS6Q8IU80 811 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 PCSK9Q8NBP7 692 aaKnown RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 STAG1Q8WVM7 1258 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ANP32BQ92688 251 aaKnown RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 ZNF669Q96BR6 464 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 IL17RAQ96F46 866 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 GLT1D1Q96MS3 346 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 AMNQ9BXJ7 453 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 STARD7Q9NQZ5 370 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 MTMR4Q9NYA4 1195 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 FBXO40Q9UH90 709 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 STX8Q9UNK0 236 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 STXBP5LQ9Y2K9 1186 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 RANBP2P49792 3224 aaKnown RBP4.54□□□□□ -1.68
ATXN3-240ENST00000556339 PLXNA1Q9UIW2 1896 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 TRIM43BA6NCK2 446 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ASB14A6NK59 587 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 GOLGA8BA8MQT2 603 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 FOXP2O15409 715 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 PDPK1O15530 556 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 DUSP11O75319 330 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 STK10O94804 968 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 CRTAMO95727 393 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 HSP90AA1P07900 732 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 XRCC6P12956 609 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 STAT2P52630 851 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ACLYP53396 1101 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ANAPC15P60006 121 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 CNTN2Q02246 1040 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 TNFAIP2Q03169 654 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 FPGSQ05932 587 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 PPARAQ07869 468 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ADAM15Q13444 863 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 KLHL40Q2TBA0 621 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 TKFCQ3LXA3 575 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 CCDC144BQ3MJ40 725 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 FNDC7Q5VTL7 733 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 KANK2Q63ZY3 851 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 SPATC1Q76KD6 591 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 GSPT2Q8IYD1 628 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 MSL3Q8N5Y2 521 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ASB15Q8WXK1 588 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 MKL1Q969V6 931 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 RILPL2Q969X0 211 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 TRIM43Q96BQ3 446 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 CEP95Q96GE4 821 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 RNPC3Q96LT9 517 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 SEC62Q99442 399 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 PRRX2Q99811 253 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 TTPALQ9BTX7 342 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ABHD16BQ9H3Z7 469 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ZNF703Q9H7S9 590 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ACAD9Q9H845 621 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 GRPEL1Q9HAV7 217 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 SMURF1Q9HCE7 757 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 KCNH7Q9NS40 1196 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 ADAMTS5Q9UNA0 930 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 RIPK3Q9Y572 518 aa4.53□□□□□ -1.68
ATXN3-240ENST00000556339 LAMA2P24043 3122 aaKnown RBP4.53□□□□□ -1.68
ATXN3-240ENST00000556339 TTC41PQ6P2S7 1318 aa4.52□□□□□ -1.69
ATXN3-240ENST00000556339 A0A0U1RQG5 324 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-240ENST00000556339 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-240ENST00000556339 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-240ENST00000556339 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
ATXN3-240ENST00000556339 PTPDC1A2A3K4 754 aa4.52□□□□□ -1.69
ATXN3-240ENST00000556339 B4DLN1 442 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms