RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 MTF1Q14872 753 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 SYT13Q7L8C5 426 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 TMEM86AQ8N2M4 240 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 CCDC26Q8TAB7 109 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 ATP2A3Q93084 1043 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 CHFRQ96EP1 664 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 HHIPQ96QV1 700 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 ACBD6Q9BR61 282 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 TMEM206Q9H813 350 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 RXFP3Q9NSD7 469 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 TMLHEQ9NVH6 421 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 DUS2Q9NX74 493 aaKnown RBP16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 EXOC7Q9UPT5 735 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 MYO16Q9Y6X6 1858 aa16.61■□□□□ 0.25
SUPT16H-205ENST00000556217 TRAV19A0A0A6YYK7 116 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 C1QTNF9BB2RNN3 333 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 NOL4O94818 638 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 CKMP06732 381 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 USP17L7P0C7H9 530 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 C1QTNF9P0C862 333 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 GJA4P35212 333 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 IFNAR2P48551 515 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 GPR15P49685 360 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 TFAMQ00059 246 aaKnown RBP16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 NR1H3Q13133 447 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 PLK5Q496M5 336 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 ZNF720Q7Z2F6 126 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 PDCL2Q8N4E4 241 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 RPLP0P6Q8NHW5 317 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 CD101Q93033 1021 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 LSM14BQ9BX40 385 aaKnown RBP16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 ECT2Q9H8V3 914 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 FBRSL1Q9HCM7 1045 aaKnown RBP16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 TRPC7Q9HCX4 862 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 KIAA1549LQ6ZVL6 1849 aa16.6■□□□□ 0.25
SUPT16H-205ENST00000556217 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 NUP205Q92621 2012 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 ITGB3P05106 788 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 CYP2F1P24903 491 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 PSMD2Q13200 908 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 DDR2Q16832 855 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 SDHAF4Q5VUM1 108 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 BRAPQ7Z569 592 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 C11orf74Q86VG3 221 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 SFR1Q86XK3 245 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 SPATA18Q8TC71 538 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 FAM213AQ9BRX8 229 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 DUSP15Q9H1R2 295 aaPredicted RBP16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 EBF1Q9UH73 591 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
SUPT16H-205ENST00000556217 HELZP42694 1942 aaKnown RBP16.58■□□□□ 0.25
SUPT16H-205ENST00000556217 TMEM8BA6NDV4 472 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 LDHAP00338 332 aaKnown RBP16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 GAP43P17677 238 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 PCSK1P29120 753 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 ADSSP30520 456 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 LHX1P48742 406 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 PDE6CP51160 858 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 CREB5Q02930 508 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 DMC1Q14565 340 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 ZNF77Q15935 545 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 DYMQ7RTS9 669 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 SPATA2LQ8IUW3 424 aaPredicted RBP16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 STKLD1Q8NE28 680 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 RIN3Q8TB24 985 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 SMOC1Q9H4F8 434 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 STK17AQ9UEE5 414 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 ITGA11Q9UKX5 1188 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.24
SUPT16H-205ENST00000556217 DSPP15924 2871 aaKnown RBP16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 TADA3O75528 432 aa16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 PPP1R37O75864 691 aa16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 CAVIN2O95810 425 aa16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 ACAT1P24752 427 aaKnown RBP16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 GRIN1Q05586 938 aa16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 USP4Q13107 963 aa16.57■□□□□ 0.24
SUPT16H-205ENST00000556217 KCNB1Q14721 858 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms