RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 RPN1P04843 607 aaKnown RBP17.32■□□□□ 0.36
CHGA-204ENST00000556076 CCNE1P24864 410 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 LHX1P48742 406 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 DLG4P78352 724 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 NFE2Q16621 373 aaPredicted RBP17.32■□□□□ 0.36
CHGA-204ENST00000556076 TXNDC11Q6PKC3 985 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 SPATA2LQ8IUW3 424 aaPredicted RBP17.32■□□□□ 0.36
CHGA-204ENST00000556076 TTC16Q8NEE8 873 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 DEPDC1BQ8WUY9 529 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 NKD2Q969F2 451 aaPredicted RBP17.32■□□□□ 0.36
CHGA-204ENST00000556076 MYLPFQ96A32 169 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 SLC22A12Q96S37 553 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 BCO2Q9BYV7 579 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 KCTD10Q9H3F6 313 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 TMEM30AQ9NV96 361 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 GTSE1Q9NYZ3 720 aa17.32■□□□□ 0.36
CHGA-204ENST00000556076 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
CHGA-204ENST00000556076 R3HCC1Q9Y3T6 440 aaKnown RBP17.32■□□□□ 0.36
CHGA-204ENST00000556076 FANCMQ8IYD8 2048 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
CHGA-204ENST00000556076 DPYSL4O14531 572 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 BDNFP23560 247 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 CDC25CP30307 473 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 HOXC13P31276 330 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 SYKP43405 635 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 RAP1GAPP47736 663 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 CACNA2D1P54289 1103 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 CSTF1Q05048 431 aaKnown RBP17.31■□□□□ 0.36
CHGA-204ENST00000556076 FCHO2Q0JRZ9 810 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 MTAPQ13126 283 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 WDR72Q3MJ13 1102 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 MDH1BQ5I0G3 518 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 TDRD10Q5VZ19 366 aaKnown RBP17.31■□□□□ 0.36
CHGA-204ENST00000556076 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 C12orf56Q8IXR9 622 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 FAM3CQ92520 227 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 CLDN23Q96B33 292 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 GCNAQ96QF7 691 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 XYLT2Q9H1B5 865 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 SMYD3Q9H7B4 428 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHGA-204ENST00000556076 RBM12Q9NTZ6 932 aaKnown RBP17.31■□□□□ 0.36
CHGA-204ENST00000556076 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 GPR179Q6PRD1 2367 aa17.31■□□□□ 0.36
CHGA-204ENST00000556076 CHADO15335 359 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 VNN1O95497 513 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 FGF19O95750 216 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
CHGA-204ENST00000556076 PCSK1P29120 753 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 CDH8P55286 799 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 USP46P62068 366 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 CYP27A1Q02318 531 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 SMARCB1Q12824 385 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 SCARA5Q6ZMJ2 495 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 CMTM8Q8IZV2 173 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 PARD3BQ8TEW8 1205 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 USP13Q92995 863 aaPredicted RBP17.3■□□□□ 0.36
CHGA-204ENST00000556076 OSBPL6Q9BZF3 934 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 TRPC7Q9HCX4 862 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 ABCB6Q9NP58 842 aa17.3■□□□□ 0.36
CHGA-204ENST00000556076 FAM237AA0A1B0GTK4 181 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 CLDN5O00501 218 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 LAMTOR5O43504 91 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 PHACTR2O75167 634 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 CSH1P0DML2 217 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 CSH2P0DML3 217 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 GNL1P36915 607 aaPredicted RBP17.29■□□□□ 0.36
CHGA-204ENST00000556076 KPNA1P52294 538 aaPredicted RBP17.29■□□□□ 0.36
CHGA-204ENST00000556076 RPL10AP62906 217 aaKnown RBP17.29■□□□□ 0.36
CHGA-204ENST00000556076 DPYDQ12882 1025 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 BIRC3Q13489 604 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 KRBA2Q6ZNG9 492 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 OR6B3Q8NGW1 331 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 CSGALNACT1Q8TDX6 532 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 PCED1BQ96HM7 432 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 SDCBP2Q9H190 292 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 SNX25Q9H3E2 840 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 LMAN1LQ9HAT1 526 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 CDH9Q9ULB4 789 aa17.29■□□□□ 0.36
CHGA-204ENST00000556076 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 OTOL1A6NHN0 477 aaPredicted RBP17.28■□□□□ 0.36
CHGA-204ENST00000556076 SPECC1L-ADORA2AF8WAN1 911 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 NOL4O94818 638 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 CLSTN1O94985 981 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 NR3C1P04150 777 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 ARSAP15289 507 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 SNRPFP62306 86 aaKnown RBP17.28■□□□□ 0.36
CHGA-204ENST00000556076 TNNC1P63316 161 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 ORC1Q13415 861 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 TRPC3Q13507 836 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 GAS6Q14393 721 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 CFAP221Q4G0U5 840 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 C1orf220Q5T0J3 134 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 NAIF1Q69YI7 327 aaPredicted RBP17.28■□□□□ 0.36
CHGA-204ENST00000556076 DPH6Q7L8W6 267 aa17.28■□□□□ 0.36
CHGA-204ENST00000556076 SMYD4Q8IYR2 804 aaPredicted RBP17.28■□□□□ 0.36
CHGA-204ENST00000556076 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms