RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 DNAJC19Q96DA6 116 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 INTS4Q96HW7 963 aaKnown RBP7.22□□□□□ -1.25
PSEN1-216ENST00000556066 NELL2Q99435 816 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 LPIN3Q9BQK8 851 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 OSBPL6Q9BZF3 934 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 GPR88Q9GZN0 384 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 DNAJC25Q9H1X3 360 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 ATXN3LQ9H3M9 355 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 ST6GALNAC4Q9H4F1 302 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 ZSCAN16Q9H4T2 348 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-216ENST00000556066 PCIF1Q9H4Z3 704 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 ZNF334Q9HCZ1 680 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-216ENST00000556066 PANK4Q9NVE7 773 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 ABI2Q9NYB9 513 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-216ENST00000556066 DSEQ9UL01 958 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 MTMR6Q9Y217 621 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 C2CD2Q9Y426 696 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 STYXL1Q9Y6J8 313 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 CFAP47Q6ZTR5 3102 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 RALGAPA1Q6GYQ0 2036 aa7.22□□□□□ -1.25
PSEN1-216ENST00000556066 COL4A2P08572 1712 aa7.21□□□□□ -1.25
PSEN1-216ENST00000556066 A0A087X0B3 334 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 KPNA7A9QM74 516 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 MAN2B1O00754 1011 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 KINO60870 393 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 PRPF6O94906 941 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ITGB3P05106 788 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CYP11A1P05108 521 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 HSP90AA1P07900 732 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 KRT19P08727 400 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 GABRR2P28476 465 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 POLR2BP30876 1174 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 TUFMP49411 452 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CASP5P51878 434 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 WNT7BP56706 349 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 BFSP1Q12934 665 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 VEPH1Q14D04 833 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 FOXD4L6Q3SYB3 417 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ARHGAP15Q53QZ3 475 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 L1TD1Q5T7N2 865 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 GPR158Q5T848 1215 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 TSSK4Q6SA08 328 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 FOXD4L3Q6VB84 417 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 GAREM2Q75VX8 874 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 TMC8Q8IU68 726 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ARID3BQ8IVW6 561 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 MFSD6LQ8IWD5 586 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CCDC65Q8IXS2 484 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 MAML2Q8IZL2 1156 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 TTC8Q8TAM2 541 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CSGALNACT1Q8TDX6 532 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 GIPC2Q8TF65 315 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CACTINQ8WUQ7 758 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 DEPDC1BQ8WUY9 529 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ATRIPQ8WXE1 791 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 PSMG2Q969U7 264 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 FAM84AQ96KN4 292 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF560Q96MR9 790 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 GCNAQ96QF7 691 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CBWD1Q9BRT8 395 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 LRRC3Q9BY71 257 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 FGFBP2Q9BYJ0 223 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ZCWPW1Q9H0M4 648 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 SEMA4AQ9H3S1 761 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 OLFML3Q9NRN5 406 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 RBAKQ9NYW8 714 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 AGAP1Q9UPQ3 857 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 GPSM3Q9Y4H4 160 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ASB3Q9Y575 518 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 PIAS3Q9Y6X2 628 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 CNOT1A5YKK6 2376 aaKnown RBP7.21□□□□□ -1.26
PSEN1-216ENST00000556066 ZFHX4Q86UP3 3567 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 NCANO14594 1321 aa7.21□□□□□ -1.26
PSEN1-216ENST00000556066 SLC38A8A6NNN8 435 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 POM121CA8CG34 1229 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 SPTLC2O15270 562 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 EXTL3O43909 919 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 HUS1O60921 280 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 FGF19O95750 216 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 LDHAP00338 332 aaKnown RBP7.2□□□□□ -1.26
PSEN1-216ENST00000556066 TMEM191BP0C7N4 346 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 ATF6P18850 670 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 CCNE1P24864 410 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 PNPLA4P41247 253 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 MAGEA9P43362 315 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 SOX9P48436 509 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 CYP4F8P98187 520 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 TSPY1Q01534 308 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 VAC14Q08AM6 782 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 MTAPQ13126 283 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 ALCAMQ13740 583 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 NFKBIBQ15653 356 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 LMBRD2Q68DH5 695 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-216ENST00000556066 LRRTM3Q86VH5 581 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 NT5DC4Q86YG4 428 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 BRSK2Q8IWQ3 736 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 KIAA2013Q8IYS2 634 aa7.2□□□□□ -1.26
PSEN1-216ENST00000556066 DCP1BQ8IZD4 617 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms