RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 PIK3R5Q8WYR1 880 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 NOX5Q96PH1 765 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 TGS1Q96RS0 853 aaKnown RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 PCDHB18PQ96TA0 734 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 HNRNPABQ99729 332 aaKnown RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 ZSWIM1Q9BR11 485 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 MED10Q9BTT4 135 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 VN1R3Q9BXE9 311 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 ZNF518BQ9C0D4 1074 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 LHX5Q9H2C1 402 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CRTAC1Q9NQ79 661 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CHST7Q9NS84 486 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 SSX2IPQ9Y2D8 614 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 MYBPHLA2RUH7 354 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 C2CD2LO14523 706 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 CCP110O43303 1012 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 ZSCAN12O43309 604 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 RTN2O75298 545 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 RB1P06400 928 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 ADORA2BP29275 332 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 MAGEA1P43355 309 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 NSFP46459 744 aaKnown RBP11.69□□□□□ -0.54
TMEM260-208ENST00000555905 CREMQ03060 361 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-208ENST00000555905 SLC39A12Q504Y0 691 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 KIAA0319Q5VV43 1072 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 NAA35Q5VZE5 725 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 DENND1BQ6P3S1 775 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 FAM171BQ6P995 826 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 PRSS55Q6UWB4 352 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-208ENST00000555905 C4orf50Q6ZRC1 276 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 KIAA1328Q86T90 577 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 SPATA2LQ8IUW3 424 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-208ENST00000555905 GPR65Q8IYL9 337 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 ANKRD52Q8NB46 1076 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 MSANTD4Q8NCY6 345 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 ACRBPQ8NEB7 543 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 LPIN3Q9BQK8 851 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 C17orf80Q9BSJ5 609 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 DESI2Q9BSY9 194 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 C11orf84Q9BUA3 381 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-208ENST00000555905 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
TMEM260-208ENST00000555905 MTRRQ9UBK8 725 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 GTF3C4Q9UKN8 822 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 PYCARDQ9ULZ3 195 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 LZTS1Q9Y250 596 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 ZKSCAN5Q9Y2L8 839 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 PCDHA13Q9Y5I0 950 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 PLXNA4Q9HCM2 1894 aa11.69□□□□□ -0.54
TMEM260-208ENST00000555905 MYH10P35580 1976 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 TNRC18O15417 2968 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 TMCO5BA8MYB1 307 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 C5orf67F2Z3F1 127 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 FTLP02792 175 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CYP1A1P04798 512 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CFHP08603 1231 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 SETSIPP0DME0 302 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CPB1P15086 417 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CDH5P33151 784 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 PBX2P40425 430 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 BCAT1P54687 386 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 ARPP19P56211 112 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 SNX16P57768 344 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 NOMO3P69849 1222 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 MLLT1Q03111 559 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CENPCQ03188 943 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 TAP1Q03518 808 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 UBE3AQ05086 875 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 SMARCB1Q12824 385 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 ACAD10Q6JQN1 1059 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 OLIG1Q8TAK6 271 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 UBA3Q8TBC4 463 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CPA5Q8WXQ8 436 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 MYLPFQ96A32 169 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 TMEM209Q96SK2 561 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 PKMYT1Q99640 499 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 PBX4Q9BYU1 374 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 KRT82Q9NSB4 513 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 MTUS1Q9ULD2 1270 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 NENFQ9UMX5 172 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 PPP2R2CQ9Y2T4 447 aa11.68□□□□□ -0.54
TMEM260-208ENST00000555905 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
TMEM260-208ENST00000555905 CLDN5O00501 218 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ZNF263O14978 683 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms