RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 RNF207Q6ZRF8 634 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 TOGARAM2Q6ZUX3 1019 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 RNF152Q8N8N0 203 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 PCSK9Q8NBP7 692 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 ZNF483Q8TF39 744 aaPredicted RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 CACTINQ8WUQ7 758 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 TNIP3Q96KP6 325 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 TRIB1Q96RU8 372 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 MYD88Q99836 296 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 HEPHQ9BQS7 1158 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 ZSWIM1Q9BR11 485 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 ZNF768Q9H5H4 540 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 PNPLA8Q9NP80 782 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 AKIP1Q9NQ31 210 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 A1CFQ9NQ94 594 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 STARD7Q9NQZ5 370 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 SACM1LQ9NTJ5 587 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 MRPS18AQ9NVS2 196 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 RNF181Q9P0P0 153 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 XPR1Q9UBH6 696 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 TRPC5Q9UL62 973 aaPredicted RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.11□□□□□ -1.75
SRP54-209ENST00000555746 SNX13Q9Y5W8 968 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 SPATA31A3Q5VYP0 1347 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 SCAPERQ9BY12 1400 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 RALGAPBQ86X10 1494 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 UGGT2Q9NYU1 1516 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 UNC13BO14795 1591 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 PCNTO95613 3336 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 PRAMEF33A0A0G2JMD5 474 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 TMEM200CA6NKL6 621 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 PRAMEF10O60809 474 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 FAM20BO75063 409 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 PPFIA4O75335 1185 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 NCR1O76036 304 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 ZFPL1O95159 310 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 HLA-DOAP06340 250 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 MYL3P08590 195 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 XRCC6P12956 609 aaKnown RBP eCLIP4.1□□□□□ -1.75
SRP54-209ENST00000555746 TSHRP16473 764 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 ZKSCAN1P17029 563 aaPredicted RBP4.1□□□□□ -1.75
SRP54-209ENST00000555746 KLRC1P26715 233 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 ANXA11P50995 505 aaKnown RBP4.1□□□□□ -1.75
SRP54-209ENST00000555746 CXADRP78310 365 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 BOP1Q14137 746 aaKnown RBP4.1□□□□□ -1.75
SRP54-209ENST00000555746 MORC3Q14149 939 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 CYP2A13Q16696 494 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 C3orf38Q5JPI3 329 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 CLNKQ7Z7G1 428 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 GAS2L3Q86XJ1 694 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 FAM186BQ8IYM0 893 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 ZNF276Q8N554 614 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 OR2C3Q8N628 320 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 SLC15A4Q8N697 577 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 PARD3BQ8TEW8 1205 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 BRI3BPQ8WY22 251 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 MYEOVQ96EZ4 313 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 SGCZQ96LD1 299 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 MOGAT1Q96PD6 335 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 RPS6KC1Q96S38 1066 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 MESP1Q9BRJ9 268 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 BRIP1Q9BX63 1249 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 NLRC4Q9NPP4 1024 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 FZD1Q9UP38 647 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 CORO2BQ9UQ03 480 aa4.1□□□□□ -1.75
SRP54-209ENST00000555746 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.1□□□□□ -1.75
SRP54-209ENST00000555746 BRWD3Q6RI45 1802 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 PYCARD-AS1I3L0S3 204 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 MYO1CO00159 1063 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 DCLK1O15075 740 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 KPNA5O15131 536 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 PEX14O75381 377 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 ERN1O75460 977 aaKnown RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 C1SP09871 688 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 PARP1P09874 1014 aaKnown RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 ATXN1LP0C7T5 689 aaKnown RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 SERPINB3P29508 390 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 STT3AP46977 705 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 BIRC2Q13490 618 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 DYRK1AQ13627 763 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 HLXQ14774 488 aaPredicted RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 LONRF3Q496Y0 759 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 MIIPQ5JXC2 388 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 SP5Q6BEB4 398 aaPredicted RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 TAF2Q6P1X5 1199 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 RHOUQ7L0Q8 258 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 SRLQ86TD4 932 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 MORC1Q86VD1 984 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 PSD4Q8NDX1 1056 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 NSUN7Q8NE18 718 aaKnown RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 OR56A3Q8NH54 315 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 SLC25A43Q8WUT9 341 aaPredicted RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 PMM1Q92871 262 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 LENG9Q96B70 501 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 NACC2Q96BF6 587 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 ZNF503Q96F45 646 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms