RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, human

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN1-215	ENST00000555616	VPS16	Q9H269	839 aa		10.3	□□□□□ -0.76
ACTN1-215	ENST00000555616	FBXL21	Q9UKT6	434 aa		10.3	□□□□□ -0.76
ACTN1-215	ENST00000555616	ASB3	Q9Y575	518 aa		10.3	□□□□□ -0.76
ACTN1-215	ENST00000555616	SNX9	Q9Y5X1	595 aa		10.3	□□□□□ -0.76
ACTN1-215	ENST00000555616	PIEZO1	Q92508	2521 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616		A0A1B0GTH6	734 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	TULP1	O00294	542 aa	Predicted RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	GABRD	O14764	452 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	SOAT2	O75908	522 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	STAU1	O95793	577 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	AFP	P02771	609 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	CFH	P08603	1231 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	HAPLN1	P10915	354 aa	Predicted RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	NPR3	P17342	541 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	AVPR2	P30518	371 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	TUFM	P49411	452 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ZNF75D	P51815	510 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	CLDN10	P78369	228 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	MYL7	Q01449	175 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	TSPY1	Q01534	308 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	NFE2	Q16621	373 aa	Predicted RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	SOWAHA	Q2M3V2	549 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	INTS6L	Q5JSJ4	861 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ASTL	Q6HA08	431 aa	Predicted RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	DPH6	Q7L8W6	267 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ITIH5	Q86UX2	942 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	OSTM1	Q86WC4	334 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	DCP1B	Q8IZD4	617 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	HS6ST3	Q8IZP7	471 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	SIX5	Q8N196	739 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	PRSS33	Q8NF86	280 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	SHKBP1	Q8TBC3	707 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	PLEKHO2	Q8TD55	490 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	GPR152	Q8TDT2	470 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	KBTBD7	Q8WVZ9	684 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	MCRS1	Q96EZ8	462 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	MRFAP1L1	Q96HT8	127 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	FNBP1	Q96RU3	617 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	SEPT5	Q99719	369 aa	Predicted RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	PRRX2	Q99811	253 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	KXD1	Q9BQD3	176 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ACBD6	Q9BR61	282 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	RPP25	Q9BUL9	199 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	XPO4	Q9C0E2	1151 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	NDST4	Q9H3R1	872 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ABCB6	Q9NP58	842 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	ARHGEF3	Q9NR81	526 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	DDX43	Q9NXZ2	648 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	SLC27A5	Q9Y2P5	690 aa		10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.29	□□□□□ -0.76
ACTN1-215	ENST00000555616	WDFY4	Q6ZS81	3184 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	KRBA1	A5PL33	1030 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	ADCY5	O95622	1261 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	FGF19	O95750	216 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	MYL4	P12829	197 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	TNNI1	P19237	187 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	AOC1	P19801	751 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	PCSK1	P29120	753 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	GTF2H1	P32780	548 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	LHX1	P48742	406 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	CLCN5	P51795	746 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	AP3M2	P53677	418 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	UBXN1	Q04323	297 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	CETN1	Q12798	172 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	KCNH2	Q12809	1159 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	VEPH1	Q14D04	833 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	MGAT5B	Q3V5L5	792 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	FAM78A	Q5JUQ0	283 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	IER5L	Q5T953	404 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	APTX	Q7Z2E3	356 aa	Known RBP	10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	TMEM105	Q8N8V8	129 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	PARD3B	Q8TEW8	1205 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	ZNF516	Q92618	1163 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	SMARCD2	Q92925	531 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	SLC35C1	Q96A29	364 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	ELSPBP1	Q96BH3	223 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	ASB16	Q96NS5	453 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	PPP1R9B	Q96SB3	815 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	LPIN3	Q9BQK8	851 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	XYLT2	Q9H1B5	865 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	MFSD1	Q9H3U5	465 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	TRPV4	Q9HBA0	871 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	RTN4	Q9NQC3	1192 aa	Known RBP	10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	TMLHE	Q9NVH6	421 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	ABI2	Q9NYB9	513 aa	Predicted RBP	10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	PCDHB5	Q9Y5E4	795 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616	CACNA1H	O95180	2353 aa		10.28	□□□□□ -0.76
ACTN1-215	ENST00000555616		A0A1W2PRU2	124 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	GOLGA6L6	A8MZA4	724 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	P4HA2	O15460	535 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	AP5Z1	O43299	807 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	TACC1	O75410	805 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	FAM163B	P0C2L3	166 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	TRIM49	P0CI25	452 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	TRIM49C	P0CI26	452 aa		10.27	□□□□□ -0.77
ACTN1-215	ENST00000555616	GJA1	P17302	382 aa		10.27	□□□□□ -0.77

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