RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ACSS3Q9H6R3 686 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 CYLDQ9NQC7 956 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 KLHL11Q9NVR0 708 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 TELO2Q9Y4R8 837 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 C2CD2LO14523 706 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 TCF4P15884 667 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 BRD2P25440 801 aaKnown RBP16.99■□□□□ 0.31
TUBB3-209ENST00000555609 PSMA2P25787 234 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 RPA3P35244 121 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-209ENST00000555609 SLC25A11Q02978 314 aaKnown RBP16.99■□□□□ 0.31
TUBB3-209ENST00000555609 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-209ENST00000555609 ZBTB8OSQ8IWT0 167 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 C10orf82Q8WW14 230 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 ACO2Q99798 780 aaKnown RBP16.99■□□□□ 0.31
TUBB3-209ENST00000555609 CHKBQ9Y259 395 aa16.99■□□□□ 0.31
TUBB3-209ENST00000555609 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 MSCO60682 206 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 SPAG6O75602 509 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 TROVE2P10155 538 aaKnown RBP eCLIP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 TGFB3P10600 412 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 KRT3P12035 628 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 ETS1P14921 441 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 KDELR1P24390 212 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 GPX6P59796 221 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 MYL6P60660 151 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 FASTKD3Q14CZ7 662 aaKnown RBP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 SEPT7Q16181 437 aaKnown RBP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 KIF2BQ8N4N8 673 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 NSMCE1Q8WV22 266 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 RSAD2Q8WXG1 361 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 ZNF75CPQ92670 426 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 TMEM121Q9BTD3 319 aa16.98■□□□□ 0.31
TUBB3-209ENST00000555609 CPSF3Q9UKF6 684 aaKnown RBP16.98■□□□□ 0.31
TUBB3-209ENST00000555609 B4GALT4O60513 344 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 TNNC2P02585 160 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 YBX3P16989 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 SSTR3P32745 418 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 CLNS1AP54105 237 aaKnown RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 OTUD4Q01804 1114 aaKnown RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 WASHC2DQ5SRD0 308 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 PDIK1LQ8N165 341 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 CPT1BQ92523 772 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 ERP27Q96DN0 273 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 FRMD8Q9BZ67 464 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 LNPEPQ9UIQ6 1025 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 STK38LQ9Y2H1 464 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 CLUHO75153 1309 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 IFNB1P01574 187 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 EDN1P05305 212 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 STIP1P31948 543 aaKnown RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 STAT5BP51692 787 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 HMGCS2P54868 508 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 SLC1A5Q15758 541 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 ZNF699Q32M78 642 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 ACCSLQ4AC99 568 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 LVRNQ6Q4G3 990 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 CMASQ8NFW8 434 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 ACTL9Q8TC94 416 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 ANKRD36BP1Q96IX9 119 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 MTMR12Q9C0I1 747 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 FAM124BQ9H5Z6 455 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-209ENST00000555609 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
TUBB3-209ENST00000555609 COL11A1P12107 1806 aaPredicted RBP16.96■□□□□ 0.31
TUBB3-209ENST00000555609 BRCA1P38398 1863 aaKnown RBP16.96■□□□□ 0.31
TUBB3-209ENST00000555609 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 APOC4-APOC2K7ER74 178 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 FAM155BO75949 473 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 IL1BP01584 269 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 LMNAP02545 664 aaKnown RBP16.96■□□□□ 0.31
TUBB3-209ENST00000555609 APOC2P02655 101 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 KRT4P19013 534 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 ADCY1Q08828 1119 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
TUBB3-209ENST00000555609 MAPK6Q16659 721 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 TXNRD3NBQ6F5E7 133 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 C3orf62Q6ZUJ4 267 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 PALM2Q8IXS6 379 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 C4orf33Q8N1A6 199 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 PRPF31Q8WWY3 499 aaKnown RBP16.96■□□□□ 0.31
TUBB3-209ENST00000555609 SEPT1Q8WYJ6 367 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 PCYT2Q99447 389 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.31
TUBB3-209ENST00000555609 TLE6Q9H808 572 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 DONSONQ9NYP3 566 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 L3MBTL1Q9Y468 752 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 LOC285556D6RIA3 1793 aa16.96■□□□□ 0.31
TUBB3-209ENST00000555609 IQANK1A0A1B0GTG1 560 aa16.95■□□□□ 0.3
TUBB3-209ENST00000555609 LIN7AO14910 233 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-209ENST00000555609 CST8O60676 142 aa16.95■□□□□ 0.3
TUBB3-209ENST00000555609 LRCH4O75427 683 aa16.95■□□□□ 0.3
TUBB3-209ENST00000555609 FARP2O94887 1054 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-209ENST00000555609 IL18RAPO95256 599 aa16.95■□□□□ 0.3
TUBB3-209ENST00000555609 TGDSO95455 350 aa16.95■□□□□ 0.3
TUBB3-209ENST00000555609 RPL22P35268 128 aaKnown RBP16.95■□□□□ 0.3
TUBB3-209ENST00000555609 ASPAP45381 313 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms