RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	C6	P13671	934 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	HSD3B1	P14060	373 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	ACVR2A	P27037	513 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	COPA	P53621	1224 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	HHEX	Q03014	270 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	ZNF844	Q08AG5	666 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	FOXO1	Q12778	655 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	FSTL1	Q12841	308 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	SPARCL1	Q14515	664 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	RAB30	Q15771	203 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	INSC	Q1MX18	579 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	AGAP9	Q5VTM2	703 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	USP51	Q70EK9	711 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	RHOT2	Q8IXI1	618 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	ANKRD35	Q8N283	1001 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	ATG16L2	Q8NAA4	619 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	PNISR	Q8TF01	805 aa	Known RBP	5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	MARS2	Q96GW9	593 aa	Known RBP	5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	SNX27	Q96L92	541 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	TRIB1	Q96RU8	372 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	OBP2B	Q9NPH6	170 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	HEYL	Q9NQ87	328 aa	Predicted RBP	5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	ZSCAN32	Q9NX65	697 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	DACT1	Q9NYF0	836 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	RGL1	Q9NZL6	768 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	GRHPR	Q9UBQ7	328 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	CAPN11	Q9UMQ6	739 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	TBC1D30	Q9Y2I9	924 aa		5.18	□□□□□ -1.58
KTN1-222	ENST00000555506	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	RAB27B	O00194	218 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	DCLK1	O15075	740 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	KCNQ3	O43525	872 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	ATXN1L	P0C7T5	689 aa	Known RBP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	IDE	P14735	1019 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	CPT1A	P50416	773 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	TOB1	P50616	345 aa	Predicted RBP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	RABGGTB	P53611	331 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	DGCR2	P98153	550 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	NHLH2	Q02577	135 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	BOP1	Q14137	746 aa	Known RBP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	ARHGEF7	Q14155	803 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	PLA1A	Q53H76	456 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	C1QL3	Q5VWW1	255 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	METRNL	Q641Q3	311 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	NAIF1	Q69YI7	327 aa	Predicted RBP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	TAPT1	Q6NXT6	567 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	USP17L6P	Q6QN14	398 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506		Q6ZRM9	215 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	C1orf210	Q8IVY1	113 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	GSPT2	Q8IYD1	628 aa	Known RBP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	PSD4	Q8NDX1	1056 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	TRAPPC12	Q8WVT3	735 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	ZNF503	Q96F45	646 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	SLC46A1	Q96NT5	459 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	PNKP	Q96T60	521 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	NEU1	Q99519	415 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	PAGR1	Q9BTK6	254 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	TMEM120A	Q9BXJ8	343 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	MAGEH1	Q9H213	219 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	CASS4	Q9NQ75	786 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	LRFN1	Q9P244	771 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	GTF2A1L	Q9UNN4	478 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	GPR52	Q9Y2T5	361 aa		5.17	□□□□□ -1.58
KTN1-222	ENST00000555506	KRTAP23-1	A1A580	65 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506		H7C4K7	107 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	ACKR2	O00590	384 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	C1S	P09871	688 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	VEGFA	P15692	232 aa	Predicted RBP	5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	TPH1	P17752	444 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	TACR2	P21452	398 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	SERPINF1	P36955	418 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	SATB1	Q01826	763 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	PPFIA1	Q13136	1202 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	FOXE3	Q13461	319 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	PTK2B	Q14289	1009 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	NPY5R	Q15761	445 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	ALF	Q53S48	1182 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	MIIP	Q5JXC2	388 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	TSHZ3	Q63HK5	1081 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	PLAG1	Q6DJT9	500 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	FCRL6	Q6DN72	434 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	HTR3D	Q70Z44	454 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	POC1B	Q8TC44	478 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	FAM71B	Q8TC56	605 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	IPO4	Q8TEX9	1081 aa	Known RBP	5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	TBC1D20	Q96BZ9	403 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	NAP1L4	Q99733	375 aa	Known RBP	5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	TTYH3	Q9C0H2	523 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	RNPEP	Q9H4A4	650 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	TMEM8A	Q9HCN3	771 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	VSX1	Q9NZR4	365 aa	Predicted RBP	5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	SHOC2	Q9UQ13	582 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	RAD54B	Q9Y620	910 aa		5.16	□□□□□ -1.58
KTN1-222	ENST00000555506	CCDC195	A0A1B0GUA6	201 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	AQP12B	A6NM10	295 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	LEFTY2	O00292	366 aa		5.15	□□□□□ -1.58
KTN1-222	ENST00000555506	EGR1	P18146	543 aa		5.15	□□□□□ -1.58

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