RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PRSS36Q5K4E3 855 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 SPOPLQ6IQ16 392 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 FAM171BQ6P995 826 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 TRIM67Q6ZTA4 783 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 MED10Q9BTT4 135 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 GPR88Q9GZN0 384 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 DNAJC25Q9H1X3 360 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 ATXN3LQ9H3M9 355 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CRTAC1Q9NQ79 661 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 UXTQ9UBK9 157 aaPredicted RBP12.9□□□□□ -0.34
SRP54-206ENST00000555317 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 MAGED2Q9UNF1 606 aaPredicted RBP12.9□□□□□ -0.34
SRP54-206ENST00000555317 NUMBLQ9Y6R0 609 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 PTPRDP23468 1912 aa12.9□□□□□ -0.35
SRP54-206ENST00000555317 TMEM221A6NGB7 291 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 M0R296 226 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 RFX1P22670 979 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 BDNFP23560 247 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 GABRR2P28476 465 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 CCR2P41597 374 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 ASPAP45381 313 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 TEAD2Q15562 447 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 DDR2Q16832 855 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 CCDC142Q17RM4 750 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 PARM1Q6UWI2 310 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 UNC93AQ86WB7 457 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 TMC8Q8IU68 726 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 SHKBP1Q8TBC3 707 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 RSAD2Q8WXG1 361 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
SRP54-206ENST00000555317 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
SRP54-206ENST00000555317 ELOVL4Q9GZR5 314 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 MFSD1Q9H3U5 465 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 CYP3A43Q9HB55 503 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 EHD2Q9NZN4 543 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 DUSP12Q9UNI6 340 aa12.89□□□□□ -0.35
SRP54-206ENST00000555317 ZNF638Q14966 1978 aaKnown RBP12.89□□□□□ -0.35
SRP54-206ENST00000555317 PRR33A8MZF0 331 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 GJA1P17302 382 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 CD58P19256 250 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 GPR15P49685 360 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 NDST1P52848 882 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
SRP54-206ENST00000555317 CBWD6Q4V339 395 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 CBWD3Q5JTY5 395 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 CBWD5Q5RIA9 395 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 ST13P5Q8NFI4 369 aaPredicted RBP12.88□□□□□ -0.35
SRP54-206ENST00000555317 FGF14Q92915 247 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 SMARCD2Q92925 531 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 SLC35C1Q96A29 364 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 ZFP14Q9HCL3 533 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
SRP54-206ENST00000555317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRP54-206ENST00000555317 SLC38A8A6NNN8 435 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 DPYSL4O14531 572 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 ECI2O75521 394 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 SRFP11831 508 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 FMO5P49326 533 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 NLRP12P59046 1061 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 MCCD1P59942 119 aaPredicted RBP12.87□□□□□ -0.35
SRP54-206ENST00000555317 ORC1Q13415 861 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 FAM78AQ5JUQ0 283 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 GPR158Q5T848 1215 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
SRP54-206ENST00000555317 ZSCAN18Q8TBC5 510 aaPredicted RBP12.87□□□□□ -0.35
SRP54-206ENST00000555317 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 MRPS31Q92665 395 aaKnown RBP12.87□□□□□ -0.35
SRP54-206ENST00000555317 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 PBXIP1Q96AQ6 731 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 E2F7Q96AV8 911 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 ELSPBP1Q96BH3 223 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 SMARCD1Q96GM5 515 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 SPATA17Q96L03 361 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 SDCBP2Q9H190 292 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
SRP54-206ENST00000555317 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
SRP54-206ENST00000555317 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
SRP54-206ENST00000555317 F8VP50 259 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 NARSO43776 548 aaKnown RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 NOL4O94818 638 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms