RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 B3GALNT2Q8NCR0 500 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 CPA5Q8WXQ8 436 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 TMEM169Q96HH4 297 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 PGLYRP2Q96PD5 576 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 CLSTN3Q9BQT9 956 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 TTPALQ9BTX7 342 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 NT5C1AQ9BXI3 368 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 B3GNT5Q9BYG0 378 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 SALL4Q9UJQ4 1053 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 PCDHB12Q9Y5F1 795 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
TDP1-211ENST00000555178 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 SOX1O00570 391 aaPredicted RBP11.43□□□□□ -0.58
TDP1-211ENST00000555178 SOAT2O75908 522 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 SOD2P04179 222 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 TYMPP19971 482 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 ABCB4P21439 1286 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 ADORA2BP29275 332 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 MAGEA1P43355 309 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 PHLDB2Q86SQ0 1253 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 KIAA1328Q86T90 577 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 DDX53Q86TM3 631 aaKnown RBP11.43□□□□□ -0.58
TDP1-211ENST00000555178 TTC30AQ86WT1 665 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 FMNL3Q8IVF7 1028 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 FUKQ8N0W3 1084 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 CRYBG2Q8N1P7 616 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 C16orf45Q96MC5 204 aaPredicted RBP11.43□□□□□ -0.58
TDP1-211ENST00000555178 PATJQ8NI35 1801 aa11.43□□□□□ -0.58
TDP1-211ENST00000555178 PRRC2BQ5JSZ5 2229 aaKnown RBP11.42□□□□□ -0.58
TDP1-211ENST00000555178 O00370 1275 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 PIK3R2O00459 728 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 LILRB3O75022 631 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 IPO7O95373 1038 aaKnown RBP11.42□□□□□ -0.58
TDP1-211ENST00000555178 PAEPP09466 180 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 VAV2P52735 878 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 BPIFB4P59827 614 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 CLEC16AQ2KHT3 1053 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 CTXN3Q4LDR2 81 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.42□□□□□ -0.58
TDP1-211ENST00000555178 VPS36Q86VN1 386 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 TMEM86AQ8N2M4 240 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 C1orf131Q8NDD1 294 aaKnown RBP11.42□□□□□ -0.58
TDP1-211ENST00000555178 SLC2A14Q8TDB8 520 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 GDPD5Q8WTR4 605 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 POF1BQ8WVV4 589 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 ARNTL2Q8WYA1 636 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 PCED1BQ96HM7 432 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 ZNF518BQ9C0D4 1074 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 ZBP1Q9H171 429 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 RRAGDQ9NQL2 400 aaPredicted RBP11.42□□□□□ -0.58
TDP1-211ENST00000555178 CDY1Q9Y6F8 540 aa11.42□□□□□ -0.58
TDP1-211ENST00000555178 SYN3O14994 580 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 MICAL2O94851 1124 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 SPATA31D3P0C874 917 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 UNGP13051 313 aaPredicted RBP11.41□□□□□ -0.58
TDP1-211ENST00000555178 GPR15P49685 360 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 ERVK-21P61565 698 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 NOMO3P69849 1222 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 PLCB3Q01970 1234 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 USP41Q3LFD5 358 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 SLC39A12Q504Y0 691 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 INTS6LQ5JSJ4 861 aaKnown RBP11.41□□□□□ -0.58
TDP1-211ENST00000555178 FAM171BQ6P995 826 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 RNF19BQ6ZMZ0 732 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 SPATA31D4Q6ZUB0 917 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 UNC93AQ86WB7 457 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 MYLPFQ96A32 169 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 ARHGEF26Q96DR7 871 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 KCNK16Q96T55 309 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 HERC2P3Q9BVR0 1158 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 THAP2Q9H0W7 228 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 PDCL3Q9H2J4 239 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 TSPAN16Q9UKR8 245 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 PAXBP1Q9Y5B6 917 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 MACROD2A1Z1Q3 448 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 WDR27A2RRH5 827 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 M0QYV0 167 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 FANCGO15287 622 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 TRAPPC3O43617 180 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 FTLP02792 175 aaPredicted RBP11.41□□□□□ -0.58
TDP1-211ENST00000555178 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
TDP1-211ENST00000555178 OR1D2P34982 312 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 LHX1P48742 406 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 GALCP54803 685 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 KRT83P78385 493 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 RBM10P98175 930 aaKnown RBP11.41□□□□□ -0.58
TDP1-211ENST00000555178 DSG1Q02413 1049 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 PTPN14Q15678 1187 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 PSMD5Q16401 504 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 SGO2Q562F6 1265 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 SDHAF4Q5VUM1 108 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 PLPP4Q5VZY2 271 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 METTL23Q86XA0 190 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 ZNF677Q86XU0 584 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 ATAD1Q8NBU5 361 aa11.41□□□□□ -0.58
TDP1-211ENST00000555178 TGS1Q96RS0 853 aaKnown RBP11.41□□□□□ -0.58
TDP1-211ENST00000555178 ACBD6Q9BR61 282 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms