RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 PCDHB13Q9Y5F0 798 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 TCHHQ07283 1943 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 EPG5Q9HCE0 2579 aa16.64■□□□□ 0.25
NEDD1-207ENST00000555114 PPP1R37O75864 691 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 RHOBTB1O94844 696 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 GCNT3O95395 438 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 CKMP06732 381 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 KRT19P08727 400 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 ARSAP15289 507 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 GARTP22102 1010 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 ADSSP30520 456 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 LHX1P48742 406 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 GPR15P49685 360 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 PDE6CP51160 858 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 GALK1P51570 392 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 SF3A2Q15428 464 aaKnown RBP16.63■□□□□ 0.25
NEDD1-207ENST00000555114 RRAGBQ5VZM2 374 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 CSGALNACT2Q8N6G5 542 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 TTC16Q8NEE8 873 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 OSCP1Q8WVF1 389 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 CD101Q93033 1021 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 FUBP3Q96I24 572 aaKnown RBP eCLIP16.63■□□□□ 0.25
NEDD1-207ENST00000555114 ZC3H10Q96K80 434 aaKnown RBP16.63■□□□□ 0.25
NEDD1-207ENST00000555114 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 ECT2Q9H8V3 914 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 L1RE1Q9UN81 338 aa16.63■□□□□ 0.25
NEDD1-207ENST00000555114 OTOL1A6NHN0 477 aaPredicted RBP16.62■□□□□ 0.25
NEDD1-207ENST00000555114 APBB3O95704 486 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 TMEM191BP0C7N4 346 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 CYP2F1P24903 491 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 GJA4P35212 333 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 MPLP40238 635 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 RBP5P82980 135 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 PSMD2Q13200 908 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 KCNB1Q14721 858 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 CCDC6Q16204 474 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 DDR2Q16832 855 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 CFAP221Q4G0U5 840 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 SDHAF4Q5VUM1 108 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 C4orf50Q6ZRC1 276 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 SYT13Q7L8C5 426 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 C11orf74Q86VG3 221 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 ADGRF2Q8IZF7 708 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 TOP6BLQ8N6T0 577 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 C1orf127Q8N9H9 656 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 RPLP0P6Q8NHW5 317 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 SAAL1Q96ER3 474 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 HHIPQ96QV1 700 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 GDAP2Q9NXN4 497 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 ANK1P16157 1881 aa16.62■□□□□ 0.25
NEDD1-207ENST00000555114 KIF26AQ9ULI4 1882 aaPredicted RBP16.62■□□□□ 0.25
NEDD1-207ENST00000555114 GREB1Q4ZG55 1949 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 ACAT1P24752 427 aaKnown RBP16.61■□□□□ 0.25
NEDD1-207ENST00000555114 ZNF77Q15935 545 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 STPG1Q5TH74 334 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 SCN4BQ8IWT1 228 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
NEDD1-207ENST00000555114 CHFRQ96EP1 664 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 ANKRD36BP1Q96IX9 119 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 EPSTI1Q96J88 318 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 OLFML3Q9NRN5 406 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 EHD2Q9NZN4 543 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 TBC1D7Q9P0N9 293 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 GTF3C4Q9UKN8 822 aa16.61■□□□□ 0.25
NEDD1-207ENST00000555114 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
NEDD1-207ENST00000555114 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
NEDD1-207ENST00000555114 TADA3O75528 432 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 NFATC1O95644 943 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 IDEP14735 1019 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 PDCP20941 246 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 HOXC13P31276 330 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 USP4Q13107 963 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 DMC1Q14565 340 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 MAPRE1Q15691 268 aaKnown RBP16.6■□□□□ 0.25
NEDD1-207ENST00000555114 PLK5Q496M5 336 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 PLA2G2CQ5R387 149 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 CCDC73Q6ZRK6 1079 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 STXBP4Q6ZWJ1 553 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 DPH6Q7L8W6 267 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 STKLD1Q8NE28 680 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 CEP295NLQ96MC4 621 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 IKZF4Q9H2S9 585 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
NEDD1-207ENST00000555114 ZNF638Q14966 1978 aaKnown RBP16.6■□□□□ 0.25
NEDD1-207ENST00000555114 MYMKA6NI61 221 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 TCF3P15923 654 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 PFKLP17858 780 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 ANXA13P27216 316 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 MAGEA11P43364 429 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 KCNA1Q09470 495 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 SURF1Q15526 300 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 N4BP2L1Q5TBK1 243 aaPredicted RBP16.59■□□□□ 0.25
NEDD1-207ENST00000555114 VSTM1Q6UX27 236 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 GPD1LQ8N335 351 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 TSTD1Q8NFU3 115 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms