RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PAPLNO95428 1278 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 GH1P01241 217 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 PDHBP11177 359 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CKBP12277 381 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ABCB4P21439 1286 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ATP5DP30049 168 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CDC25CP30307 473 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 L1CAMP32004 1257 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 EIF1AXP47813 144 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 RABGGTBP53611 331 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 GSCP56915 257 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TFAP4Q01664 338 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF252P-AS1Q0IIN9 211 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CDC16Q13042 620 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 IKQ13123 557 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SSPNQ14714 243 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 KIAA0753Q2KHM9 967 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SLC5A9Q2M3M2 681 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 KBTBD12Q3ZCT8 623 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 LRRC8DQ7L1W4 858 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 GPR155Q7Z3F1 870 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 GALNT7Q86SF2 657 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SERINC5Q86VE9 423 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ADHFE1Q8IWW8 467 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 FBXO16Q8IX29 292 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 NUP93Q8N1F7 819 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TSEN2Q8NCE0 465 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 FAM76AQ8TAV0 307 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 MDM1Q8TC05 714 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 AGR3Q8TD06 166 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 OTUD7AQ8TE49 926 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ADAMTS18Q8TE60 1221 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 HDAC7Q8WUI4 952 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 KIAA1191Q96A73 305 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TBC1D32Q96NH3 1257 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CLUHP3Q96NS8 147 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SH3GL3Q99963 347 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 USB1Q9BQ65 265 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 HERC2P3Q9BVR0 1158 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 VCX3BQ9H321 246 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 UBE2ZQ9H832 354 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 IL1RAPL2Q9NP60 686 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 POLMQ9NP87 494 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 OLA1Q9NTK5 396 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 UBP1Q9NZI7 540 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 AKAP7Q9P0M2 348 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 EPS15L1Q9UBC2 864 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SUCOQ9UBS9 1254 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CCPG1Q9ULG6 757 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 PCDHGC3Q9UN70 934 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 LIMCH1Q9UPQ0 1083 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 INSL6Q9Y581 213 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 MRFAP1Q9Y605 127 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SZT2Q5T011 3432 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TTC3P53804 2025 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF318Q5VUA4 2279 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC69A6NI79 296 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 A8MVJ9 347 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 OIP5O43482 229 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 FRS3O43559 492 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 OPA1O60313 960 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 GJB3O75712 270 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SLITRK5O94991 958 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 FAM153BP0C7A2 387 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CYP2A6P11509 494 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 P4HA1P13674 534 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 MYOGP15173 224 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SDSP20132 328 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 S100A5P33763 92 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 KRT9P35527 623 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 USP11P51784 963 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 KCNQ1P51787 676 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 PSMC6P62333 389 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CBX1P83916 185 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ACY1Q03154 408 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ZP2Q05996 745 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 COASYQ13057 564 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 BAATQ14032 418 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 KRT32Q14532 448 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF267Q14586 743 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SMAD2Q15796 467 aaKnown RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 DGKDQ16760 1214 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 RSPO4Q2I0M5 234 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ANO4Q32M45 955 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ASPRV1Q53RT3 343 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 HSP90AA4PQ58FG1 418 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 NEK5Q6P3R8 708 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 FAM173BQ6P4H8 233 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ANGPTL8Q6UXH0 198 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TMEM184AQ6ZMB5 413 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 RGS9BPQ6ZS82 235 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 OTOP2Q7RTS6 562 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 FAM114A1Q8IWE2 563 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 RNF168Q8IYW5 571 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC33Q8N5R6 958 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 Q8NFD4 153 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 TBC1D5Q92609 795 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 P2RX5Q93086 422 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF689Q96CS4 500 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC138Q96M89 665 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms