RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 VN1R3Q9BXE9 311 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 EMILIN2Q9BXX0 1053 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 KCNF1Q9H3M0 494 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 PNPLA8Q9NP80 782 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 CYLDQ9NQC7 956 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 ENTPD7Q9NQZ7 604 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 HSFX1Q9UBD0 423 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 ADAMTS1Q9UHI8 967 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 INTUQ9ULD6 942 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 PCDHB5Q9Y5E4 795 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 IRAK3Q9Y616 596 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 MYO16Q9Y6X6 1858 aa15.37■□□□□ 0.05
SHMT2-210ENST00000553950 TMEM265A0A087WTH1 108 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 GOLGA6L9A6NEM1 432 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 GRXCR1A8MXD5 290 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 ZSCAN12O43309 604 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 TBC1D4O60343 1298 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 MICAL2O94851 1124 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 C1RP00736 705 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 CYP1A1P04798 512 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 ADH1AP07327 375 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 PLEKP08567 350 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 MYBL1P10243 752 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 NPR3P17342 541 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 DNAJB2P25686 324 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 NOMO3P69849 1222 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 GPR17Q13304 367 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 PTPN14Q15678 1187 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 CLEC16AQ2KHT3 1053 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 PPP1R26Q5T8A7 1209 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 KIAA0319Q5VV43 1072 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 ALKBH5Q6P6C2 394 aaKnown RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 VSTM1Q6UX27 236 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 SLC30A5Q8TAD4 765 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 LNX1Q8TBB1 728 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 SLC2A14Q8TDB8 520 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 TFAP2BQ92481 460 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 PCED1BQ96HM7 432 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 CEP295NLQ96MC4 621 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 PKMYT1Q99640 499 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 C17orf80Q9BSJ5 609 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 TSGA10Q9BZW7 698 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 PRO3102Q9H379 93 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 DMAP1Q9NPF5 467 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 KRT82Q9NSB4 513 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 NAGPAQ9UK23 515 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 STRIP2Q9ULQ0 834 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 YBX2Q9Y2T7 364 aaKnown RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 NME7Q9Y5B8 376 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■□□□ 12.5
SHMT2-210ENST00000553950 ATG2AQ2TAZ0 1938 aa15.36■□□□□ 0.05
SHMT2-210ENST00000553950 MTCL1Q9Y4B5 1905 aaKnown RBP15.36■□□□□ 0.05
SHMT2-210ENST00000553950 A0A087X0T9 212 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-210ENST00000553950 H3BNC9 293 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 DDX3XO00571 662 aaKnown RBP eCLIP15.35■□□□□ 0.058e-15■■□□□ 14.3
SHMT2-210ENST00000553950 XPO1O14980 1071 aaKnown RBP15.35■□□□□ 0.05
SHMT2-210ENST00000553950 TRIM66O15016 1216 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 RTN2O75298 545 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 CALB1P05937 261 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 FAM228BP0C875 321 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 CCDC130P13994 396 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 CHRNB2P17787 502 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 ADORA2BP29275 332 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 MAGEA11P43364 429 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 ACADSBP45954 432 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-210ENST00000553950 ELMSAN1Q6PJG2 1045 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 RAD9BQ6WBX8 426 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 TMC7Q7Z402 723 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 KIAA1328Q86T90 577 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 FUKQ8N0W3 1084 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 C12orf29Q8N999 325 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 STK32AQ8WU08 396 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 CTNNBL1Q8WYA6 563 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-210ENST00000553950 TIFAQ96CG3 184 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 TCF25Q9BQ70 676 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 NKX2-4Q9H2Z4 354 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 RXFP1Q9HBX9 757 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 ACP6Q9NPH0 428 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 SPTLC3Q9NUV7 552 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 GTF3C4Q9UKN8 822 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
SHMT2-210ENST00000553950 PLXNA3P51805 1871 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 MYBPHLA2RUH7 354 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 C2CD2LO14523 706 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 HCRTO43612 131 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 AP1G2O75843 785 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 MYOGP15173 224 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 CA8P35219 290 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 PLA2G4AP47712 749 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 ROR1Q01973 937 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 C1QBPQ07021 282 aaKnown RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 GPM6BQ13491 265 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 PTPROQ16827 1216 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms