RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TNIP3Q96KP6 325 aa24.8■■□□□ 1.56
NEK9-203ENST00000553945 LRRC3Q9BY71 257 aa24.8■■□□□ 1.56
NEK9-203ENST00000553945 KCNK12Q9HB15 430 aa24.8■■□□□ 1.56
NEK9-203ENST00000553945 CYP3A43Q9HB55 503 aa24.8■■□□□ 1.56
NEK9-203ENST00000553945 ZNF334Q9HCZ1 680 aaPredicted RBP24.8■■□□□ 1.56
NEK9-203ENST00000553945 SORCS3Q9UPU3 1222 aa24.8■■□□□ 1.56
NEK9-203ENST00000553945 COQ4Q9Y3A0 265 aa24.8■■□□□ 1.56
NEK9-203ENST00000553945 MAGEA11P43364 429 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 MARSP56192 900 aaKnown RBP24.79■■□□□ 1.56
NEK9-203ENST00000553945 ORC1Q13415 861 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 RBM43Q6ZSC3 357 aaKnown RBP24.79■■□□□ 1.56
NEK9-203ENST00000553945 ACOT1Q86TX2 421 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 STKLD1Q8NE28 680 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 RSAD2Q8WXG1 361 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 IGSF9Q9P2J2 1179 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 HMGXB4Q9UGU5 601 aa24.79■■□□□ 1.56
NEK9-203ENST00000553945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.79■■□□□ 1.56
NEK9-203ENST00000553945 A0A1W2PRU2 124 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 NRG2O14511 850 aaPredicted RBP24.78■■□□□ 1.56
NEK9-203ENST00000553945 MOSPD3O75425 235 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 MICAL2O94851 1124 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 CD58P19256 250 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 ZXDAP98168 799 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 MTMR3Q13615 1198 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 CCDC183Q5T5S1 534 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 UNC93AQ86WB7 457 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 SHKBP1Q8TBC3 707 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 EDAQ92838 391 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 TATDN2Q93075 761 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 CNOT6LQ96LI5 555 aaKnown RBP24.78■■□□□ 1.56
NEK9-203ENST00000553945 B3GNT5Q9BYG0 378 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 GDE1Q9NZC3 331 aa24.78■■□□□ 1.56
NEK9-203ENST00000553945 CLDN5O00501 218 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 FGF19O95750 216 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 GABRR2P28476 465 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 ERCC5P28715 1186 aaPredicted RBP24.77■■□□□ 1.56
NEK9-203ENST00000553945 GRIK1P39086 918 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 KCNH2Q12809 1159 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 HTR4Q13639 388 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 TEAD2Q15562 447 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 VSTM1Q6UX27 236 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 MED10Q9BTT4 135 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 SMOC2Q9H3U7 446 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 MAGED2Q9UNF1 606 aaPredicted RBP24.77■■□□□ 1.56
NEK9-203ENST00000553945 MYO10Q9HD67 2058 aa24.77■■□□□ 1.56
NEK9-203ENST00000553945 PTPRDP23468 1912 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 ANHXE9PGG2 379 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 AFPP02771 609 aaKnown RBP24.76■■□□□ 1.55
NEK9-203ENST00000553945 CSH1P0DML2 217 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 CSH2P0DML3 217 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 INCA1Q0VD86 236 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 CETN1Q12798 172 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 TDGQ13569 410 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 POTEHQ6S545 545 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 SASS6Q6UVJ0 657 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 PARM1Q6UWI2 310 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 MTSS1LQ765P7 747 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 NXPE3Q969Y0 559 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 FAXDC2Q96IV6 333 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 GCNAQ96QF7 691 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 ZNF518BQ9C0D4 1074 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 ELOVL4Q9GZR5 314 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 ATXN3LQ9H3M9 355 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 NUMBLQ9Y6R0 609 aa24.76■■□□□ 1.55
NEK9-203ENST00000553945 SLC38A8A6NNN8 435 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 HMGA1P17096 107 aaKnown RBP24.75■■□□□ 1.55
NEK9-203ENST00000553945 ANXA13P27216 316 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 LRMPQ12912 555 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 GAREM2Q75VX8 874 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 IRF2BP1Q8IU81 584 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 UBALD2Q8IYN6 164 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 CRYBG2Q8N1P7 616 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 FGF14Q92915 247 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 ZSWIM3Q96MP5 696 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 TWNKQ96RR1 684 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 ARID3AQ99856 593 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 NT5C1AQ9BXI3 368 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 SLITRK6Q9H5Y7 841 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 ATP8B3O60423 1300 aa24.75■■□□□ 1.55
NEK9-203ENST00000553945 FAM86C2PA6NEL3 165 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 TRIM66O15016 1216 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 PMM2O15305 246 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 TRIM21P19474 475 aaKnown RBP24.74■■□□□ 1.55
NEK9-203ENST00000553945 CT47A1Q5JQC4 288 aaPredicted RBP24.74■■□□□ 1.55
NEK9-203ENST00000553945 SLC44A3Q8N4M1 653 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 C1QTNF1Q9BXJ1 281 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 DNAI2Q9GZS0 605 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 THAP9Q9H5L6 903 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 IL21Q9HBE4 155 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 CISHQ9NSE2 258 aa24.74■■□□□ 1.55
NEK9-203ENST00000553945 F8VP50 259 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 P4HA2O15460 535 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 CILPO75339 1184 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 NOL4O94818 638 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 CCDC130P13994 396 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 CDC25CP30307 473 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 MTIF2P46199 727 aaKnown RBP24.73■■□□□ 1.55
NEK9-203ENST00000553945 CACNA2D1P54289 1103 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 ZNF394Q53GI3 561 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 ARHGAP15Q53QZ3 475 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms